Brassica oleracea (wild cabbage): 106292700
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Entry
106292700 CDS
T04124
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
boe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106292700
09124 Replication and repair
03420 Nucleotide excision repair
106292700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106292700
03400 DNA repair and recombination proteins [BR:
boe03400
]
106292700
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106292700
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106292700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
106292700
NCBI-ProteinID:
XP_013583795
UniProt:
A0A0D3CB70
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All DBs
Position
C5:complement(8738815..8741155)
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AA seq
300 aa
AA seq
DB search
MATVASKLYSDDGSLLVLLLDTNPLFWSNTSTTFSQFLSHVLAFLNAVLGLNQLNQVVVI
ATGYCSCDYIYDSSLTLSGNSESGRTGMPALFASFLEKLEDFIVKDEELIKEQEHDERIA
SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI
DSCYIGTQNSAFLQQASYITGGVHHAPKQLDGLFQFLTTIFATDLHTRSFVQLPKPVGVD
FRASCFCHKKTIDMGYVCSVCLSIFCEHHKKCSTCGSVFGQSKLDGASTVSEKKRKAPDS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgcttctaagctctattcagacgatggaagtcttctagtgttgttgctt
gatacgaatcccttgttctggagcaatacgtcgacgacattctctcagttcctctctcat
gtgcttgcgtttctgaacgcggttttggggttgaatcaactgaaccaagttgtagtgata
gctactgggtactgttcgtgtgattacatttacgattcgtctttgacattgagtgggaac
tccgagagtggtagaactggaatgcctgctctttttgcttctttccttgagaagttggaa
gattttattgttaaagatgaggagcttatcaaggagcaggagcatgatgagaggatagct
tcttctctcttgtcaggatcactctctatggctctttgctatatacagagggttttccgt
tctggacatcttcatccccagcctcggattttatgcttgcaaggctcccctgatggcccg
gaacaatatgtagcggttatgaactctatcttctcagcacaacgcttaatggtacccatt
gattcctgttacataggtacacagaactcggcatttttgcagcaggcatcttacataacc
ggcggtgtacatcatgcacctaaacagttggatgggctgtttcagtttctaacgacgatc
tttgccactgatttgcacacccgcagctttgtacaacttccaaaacccgttggcgttgat
tttcgagcatcgtgtttttgccacaagaagactatcgatatggggtatgtatgttcggta
tgtctgtccattttctgtgagcatcacaagaaatgttcaacgtgcgggtctgtttttggt
cagtctaagcttgatggtgcttcgactgtcagtgaaaagaagagaaaagctcctgattct
taa
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integrated database retrieval system
