Brassica oleracea (wild cabbage): 106292733
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Entry
106292733 CDS
T04124
Name
(RefSeq) syntaxin-61-like isoform X1
KO
K08500
syntaxin of plants SYP6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106292733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106292733
Membrane trafficking [BR:
boe04131
]
SNARE
SNAP-25[C] (Qc)
STX6
106292733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF3394
ATG17_like
YqbF_HeH
PDCD10_N
CCDC-167
Motif
Other DBs
NCBI-GeneID:
106292733
NCBI-ProteinID:
XP_013583833
UniProt:
A0A0D3CEB2
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Position
C5:18218766..18220830
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AA seq
245 aa
AA seq
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MSSAQDPFYIVKEEIQDSIDKLQSAFHKWERISPGMGDQVHATKELLANCGSIEWQVDEL
EKAITVAAKDPALYGIDQAELERRRRWTSNARTQVRNVKTGVLAGKGNAGVGNASEVRLE
LMRMPNSNEANRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVERIGGVGLTI
HDELVAQERIIDELGTEMDSTKNRLDFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV
LVFLT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgcaagatccattctacattgttaaagaagagatccaagattctattgat
aagttgcaatcagcattccacaaatgggagcgtatctctccaggcatgggggatcaagtc
catgccaccaaagagcttcttgctaactgtggaagcatcgagtggcaggtagatgagctg
gaaaaagcgattaccgttgcagcaaaagatcctgccttgtatggcattgatcaggctgag
cttgaacgacgcaggagatggactagtaatgctaggacacaggtgcggaatgtgaagact
ggtgttctagctggtaagggtaatgctggagttggtaatgcaagtgaagtgcgcctggaa
ttaatgagaatgccaaactcgaatgaggcaaatagatacgatcagtatggaggaagagac
gatgatggttttgtacaatcagaatcagataggcagatgctgttgataaagcaacaagat
gaagaattggatgagctgagtaaaagtgtagagagaattggaggggtggggcttactata
catgatgaacttgttgcacaggagagaataatagatgaattgggtacagagatggacagt
acaaagaacaggcttgactttgttcagaaaaaagtggggatggtaatgaagaaagcagga
gcgaaagggcagatgatgatgatatgtttcttgctcgtcttgttcatcatcctattcgtt
ctcgtcttcttgacctaa
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