Brassica oleracea (wild cabbage): 106292924
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Entry
106292924 CDS
T04124
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106292924
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106292924
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
NRIP1_repr_2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
106292924
NCBI-ProteinID:
XP_013584045
UniProt:
A0A0D3C7E3
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Position
C5:complement(1059085..1061526)
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AA seq
479 aa
AA seq
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MTAEDRTISSSGGYVQSSSTTGHVDHHHELESFNPPPAKKKRNLPGNPDPEAEVIALSPT
TLMATNRFLCEICRKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKSCVHHH
PTRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFS
RRDSFITHRAFCDALAEETARLNAASHLKSLTSNNLNYHYLMGTLIPSPPPFPFGPPQPL
QQHHFPITTNTFDHHHHDVMKPASSLSLWMGGNNNHHQVTVDEGIAPQEDYNWVFGNANN
RGELITTSDSLITHENINIVSSKENANAATSLSVPSLFSSVDHITQDANAASSAVANMSA
TALLQKAAQMGVTSSTPTTITTKQSTFHQTVEEGGSDKFFALFGPNSVGLMSNNGLQHEI
ENPRSGVTVASGIDELQNYPLKRRRVESVDAGGGGQTRDFLGVGVQTMCHHSSSINGWI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaggatcggacaatttcaagtagtggaggatatgtccaaagctcatcaaca
actggtcatgttgatcatcatcatgagcttgaatcctttaatcctcctcctgctaagaag
aaaagaaacctccctggaaaccctgatccagaagccgaagtcatagctctatccccaacg
acgcttatggccacaaaccgcttcctctgtgagatatgtagaaaaggtttccaaagagac
cagaatctacagcttcaccgtcgaggacacaacctcccatggaaactaaagcagaggacc
accaaagaagtacggaaacgagtgtatgtgtgtccagagaagagttgcgttcatcaccat
ccgacaagggcactaggtgaccttacaggaatcaagaaacatttttgtcggaaacatgga
gagaagaagtggaagtgcgagaaatgctccaagagatatgcagttcaatccgattggaag
gctcattcaaagacctgtgggactagagagtatagatgtgactgtggtacaattttctcc
aggagagacagctttatcacgcatagagcattttgcgacgccttagcagaagaaaccgct
aggctaaacgcagcttctcatctcaaaagccttaccagtaataacctaaactaccattat
ctcatgggcacacttataccatcaccaccaccatttccattcggaccaccacagccactg
caacagcaccacttccctataacgaccaacactttcgatcatcatcatcatgacgtcatg
aaacctgcttcttcgctctccctatggatgggaggaaacaacaatcatcatcaagtgacc
gtagacgaaggtatcgcaccgcaagaggattacaattgggttttcgggaacgcaaataat
cgcggcgagttaataacgactagcgattcacttatcactcatgaaaatatcaacatagtt
tcgagtaaggaaaacgcaaacgcggctacttcactttccgtgccttctctttttagcagc
gtcgaccacatcacacaagacgcaaacgcagcttcctcggcggttgcgaacatgtcagca
actgcattacttcaaaaagcggctcagatgggcgtgacttcttctactccgacgacgatc
accaccaaacaatccacgtttcatcagactgtagaagaaggtggcagcgataagttcttc
gctttgtttggaccgaacagcgtcggtttaatgagtaacaatggtcttcaacacgagatc
gagaaccctagaagtggcgttacggtagcctcggggattgatgagttacaaaactacccc
ttgaaacgtagaagagttgagagtgtggatgcaggaggaggagggcaaactcgagatttc
ctaggagttggtgtacaaacaatgtgccatcattcatcctctatcaatggatggatttga
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