KEGG   Brassica oleracea (wild cabbage): 106293279
Entry
106293279         CDS       T04124                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03020  RNA polymerase
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106293279
  09124 Replication and repair
   03420 Nucleotide excision repair
    106293279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106293279
   03400 DNA repair and recombination proteins [BR:boe03400]
    106293279
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106293279
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106293279
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 106293279
NCBI-ProteinID: XP_013584387
LinkDB
Position
C5:17388117..17389948
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVIEKSLQ
YVKRFSRYKNPDAVRQVREILSRHQFTEFELCVLGNLCLETAKEAVAMVPSLKTKGSAHS
NKATENILNDLSLVKRFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccggagaagaagaagagaacgctgccgaactcaagattggagatgagtttttgaag
gcaaagtgcttaatgaactgtgaagtgtctttgatccttgagcacaagtatgaacagctt
cagcaagtctccgaggatcctatgaatcaagtttctcaagtgattgagaagtctttgcag
tatgtgaagcgatttagtcggtacaagaatccagatgctgttcgacaagttcgagaaatc
ttgagcaggcatcagttcactgagtttgagctttgcgttcttggcaatctctgtcttgaa
actgctaaagaagcagtggcaatggttccttctctcaaaacaaaaggaagtgctcatagt
aataaagcgaccgagaatatacttaatgatctctcccttgtcaagagattcgagtag

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