Brassica oleracea (wild cabbage): 106293280
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Entry
106293280 CDS
T04124
Name
(RefSeq) ABC transporter E family member 1 isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106293280
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
106293280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
AAA
NACHT
DUF5906
Fer4_6
AAA_23
AAA_16
Rad17
nSTAND3
RsgA_GTPase
AAA_15
TsaE
AAA_33
AAA_29
Fer4_21
VapE-like_dom
Fer4_9
Fer4_2
SRP54
Fer4_10
AAA_30
AAA_5
NB-ARC
Fer4_4
AAA_24
Fer4_16
ORC-CDC6-like
AAA_19
AAA_7
Fer4_7
Fer4_8
Fer4_17
DLIC
Motif
Other DBs
NCBI-GeneID:
106293280
NCBI-ProteinID:
XP_013584391
UniProt:
A0A0D3ADX4
LinkDB
All DBs
Position
C1:39095378..39098390
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AA seq
603 aa
AA seq
DB search
MADRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGRLCIEVTPTSKTAFLSEELCIGCGI
CVKKCPFEAIQIINLPKDLEKDTTHRYRSNAFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGRFDNPPDWQEILAHFRGSELQSYFTRVVEENLKTAIKPQHVDQIKKIV
QGDLGKMLEKLDERGMREQIVADLELNPVLDRRARDVSGGELQRFAIAAVFIKKAEIYMF
DEPSSFLDVRQRLKAAQVIRSLLRPDSYVIVVEHDLSVLDYLSDFVCCLYGKPTAYGVVT
LPFSVREGINVFLAGFIPTENLRFRDESLTFKVSETPQESDGEVKSYARYKYPNMSKTLG
SFKLEVMEGDFTDSQIVVMLGENGTGKTTFIRMLAGALKPDEGVEEDMPVFNVSYKPQTY
DAQRECSVRQLLHERIRDAYMHPQFVSDVMKPLQIEQLLDQAICTLSGGESQRVGITLCL
GKPADIYLIDEPSAYLDSEQRITASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIVYE
GQPSIKCMAHSPQSLLSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGSYYY
LDD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgattgacgcggattgctattgtgagcgaagaccggtgcaaaccaaaaaaa
tgtcgccaggaatgcaagaagagctgtcctgttgtcaagacagggagactttgtattgaa
gtcactcctacttccaagacggcattcttatcagaggagctgtgtataggatgtggtatc
tgcgtgaagaaatgcccgtttgaggctattcaaattatcaatcttccaaaggatctagag
aaagatacaacccaccgctataggtccaatgctttcaaattgcacaggctcccagttcca
aggccgggccaagtcctagggttggtcgggacaaacggtattgggaaatcaacggctctc
aaaatcttggctggaaaacttaaaccaaatcttggcaggttcgataatcctccggactgg
caagaaattttggcccacttccgcgggtcagaacttcaaagctatttcacccgagttgta
gaagaaaatctaaagacggctataaagccccaacatgtggaccagataaaaaaaattgtt
caaggtgatcttgggaagatgcttgagaagctggacgagagaggaatgagggagcagatt
gtcgctgatctggaattgaacccggtactggaccgtagagcaagagatgtatctggtgga
gagcttcagaggtttgccattgccgctgttttcatcaagaaggctgagatatacatgttt
gatgaaccatctagcttcctcgatgtgaggcaaagactcaaagctgctcaagttatacgc
tcactcctcaggcctgacagctacgtgattgttgtggagcatgacctcagcgtcctagac
tatttgtcagacttcgtctgctgtctgtatggaaaaccaacagcatatggtgtcgtgact
ctccccttttctgtcagagaaggaatcaacgtgttcttggctggctttattcccactgaa
aacttgcgtttcagggacgaatctctgaccttcaaggtttctgagactccacaagaaagt
gatggggaagtgaagtcctatgcaagatacaaatacccaaacatgagtaagactcttgga
agtttcaagctggaggtgatggaaggtgacttcaccgactctcagattgttgtaatgctt
ggggagaacggtactgggaaaactaccttcatccggatgctggcaggtgcactgaaacct
gacgagggtgtagaagaagatatgccagtgtttaatgtgtcttacaaaccgcaaacttat
gatgcgcagcgtgagtgttcagtgagacagttgctccatgagaggatccgtgatgcttat
atgcatcctcaatttgtatcggatgtaatgaaaccgcttcagattgagcagctgttggat
caagcaatttgcacgctctcgggtggagagtcgcagagggttggcataacgttatgcctg
gggaagcctgctgatatatatctgatagatgagccaagtgcgtatctcgactctgagcag
agaatcacagcgtcaaaggtcataaagcgcttcatcctccacgcaaagaaaacagccttt
attgtggagcatgactttattatggcaacctatctggcggaccgagtcatagtgtatgaa
ggacaaccatctatcaagtgtatggctcattctccacagtcactccttagcggaatgaac
ctcttcttatcgcacctgaacatcacattcagacgtgatcccactaacttcaggccaagg
atcaacaaattagagtctacaaaggacagggagcagaagtctgctggctcatactactac
ttggacgactga
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