Brassica oleracea (wild cabbage): 106293327
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Entry
106293327 CDS
T04124
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106293327
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106293327
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
106293327
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
106293327
NCBI-ProteinID:
XP_013584447
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Position
C5:complement(44932167..44935854)
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AA seq
601 aa
AA seq
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MNGQDLELEKARLLSLATRLGFDEESAKKCLDRFVDLYGDDGRDFITVELCGDDFLAALA
DFEEGTEEWDDVQALETEAQGTLAEMFNRGNTSDNGFETDDGESSVQVHVIEDSPESKNK
PDVMELDSSSDFEDDEDTQTGSRSHSLRSMEYSMEDSVPTISGRKPSVPTSGKDHETPSY
EELQALDDLEFANLVIFGNKVFRPLQHQACRASMEKKDCFVLMPTGGGKSLCYQLPAALK
TGVTIVISPLLSLIQDQIVALNLKFGVPATFLNSQQTSSQAAIVLQELRRDNPSCKLLYV
TPEKIAGSSSFLETLKCLDGKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVP
VMALTATATESVCQDVLKSLRIPRAPVLKMSFDRTNLKYEVINKTKEPLKQLQELLKDRF
KDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGMPAKQRVDVQRKWQTGEVRIVCAT
IAFGMGIDKADVRFVIHNTLSKAIESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLR
NGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLDYFGESFDRRICKSSLHPCDNCEK
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcaggatctcgaactggagaaagctcggttgctgagcctcgctaccagactc
ggattcgacgaagagtccgcgaagaaatgcttggatcgattcgtcgatctctacggtgat
gatggtcgagatttcatcactgttgagttatgtggagacgattttctcgcggcgttggct
gatttcgaggaaggaaccgaggaatgggatgacgtacaggctttggagaccgaagctcag
ggaacgttggctgagatgtttaatagaggtaacactagtgataacggattcgagactgat
gatggtgagtcgagtgtccaagttcatgtcattgaggattctcctgagtcgaagaataaa
cctgacgtgatggagctggattcttctagtgattttgaagatgatgaggatacgcagaca
ggttctagaagtcactctttgagatccatggaatattccatggaagattcagtaccaacg
atttcaggcagaaaaccttctgtacctacatcaggcaaggaccatgaaactccaagctac
gaagagttgcaggcgttggatgatctggaatttgcgaacttggttatttttgggaacaag
gtgttccggcccctgcagcatcaagcatgtagagcatctatggaaaagaaggattgcttt
gttctaatgccgacgggaggggggaaaagtttgtgttaccagcttcctgcagcactgaaa
actggagttaccatagttatatctcctctgttatccctcatccaggatcagatagttgca
ctgaatcttaagttcggtgtaccagcaacttttctgaactctcagcaaacatcttcccaa
gcagcaattgtattacaagagctcagaagagataatccgtcatgtaaactcttatatgtg
acacctgagaaaatcgctggaagttcatcctttttggagacactaaaatgcttagacggc
aagggcctgctggccggttttgtggttgatgaggctcactgcgtgagccaatggggacat
gacttccggccagactacagagaactgggatgtcttaaacagaactttccccgtgttccg
gtgatggctcttacagccacagctactgaatcagtctgtcaggacgtactaaaaagtctg
agaatccccagggctccggttctcaagatgagctttgaccgaaccaatttaaagtacgag
gtgatcaacaagaccaaggagccactcaaacagctgcaagagctgctaaaagaccggttc
aaggatcagtctgggatcgtttactgtctctccaaaagcgaatgtgttgatgtagcaaag
tttctgaacgagaaatgcaaagtgaagactgtttactaccacgctggtatgcctgcgaaa
cagagagttgatgttcagaggaaatggcaaacaggggaggttcggattgtttgtgcgacc
attgcatttgggatgggaatagacaaagcagacgtgcgttttgttatacacaacacattg
tcaaaagcgatagaaagctactaccaagaatcagggagagcaggaagggacgggcttcaa
gcgcagtgcatttgcttgtaccagaagaaagattttagcagagtcgtctgcatgctgcgt
aacggacaaggcagaaacatggatagattcaagtcagccatggctcaggccaagaagatg
cagcagtactgtgagcttaagactgaatgcagaagacagatgctactagactactttgga
gagtcattcgaccgaaggatttgtaaaagcagtttacatccgtgtgataactgtgaaaag
agctga
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