Brassica oleracea (wild cabbage): 106293690
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Entry
106293690 CDS
T04124
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 9, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00900
Terpenoid backbone biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106293690
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
boe01006
]
106293690
Enzymes [BR:
boe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106293690
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106293690
2.5.1.29 geranylgeranyl diphosphate synthase
106293690
Prenyltransferases [BR:
boe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106293690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
106293690
NCBI-ProteinID:
XP_013584807
UniProt:
A0A0D3CK70
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Position
C5:40080953..40082336
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AA seq
359 aa
AA seq
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MATVHLSSSSLFIQFKGRRYNSIPSVKSLQKRNVLSISSALTSRGGDMITPHGKGNDHNS
STFDFKSYMTRKAESVNAALDVCVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVG
GDEASAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLAL
AFENMTVVSSGLVALERTVRAVTELAKAIGMKGLVAGQMVDLRSQGLNPEDAGLERLEFI
HLHKTAALLEASAVLGVIMGSGTDEEIKRLRKYARCIGLLFQVVDDILDVTKSTEELGKS
AGKDVMAGKLTYPRLIGLEKSRELAETLSREAEEQLLGFDPNKAAPLVALASYIAGRHN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttcatctcagctcatcatccctcttcatacaattcaaaggaagaagatac
aactccataccctccgtcaagagtcttcaaaaacgcaacgttttgtctatctcatctgct
ctcacgtcacgaggtggagacatgattacaccacacggtaaaggaaatgatcacaactcc
tccacctttgacttcaagtcatatatgacccgtaaagccgaatctgtgaacgctgctcta
gacgtttgcgtaccgcttctgaaaccccttacgattcaagaggcggtgcggtactcattg
ctagctggtggaaaacgcgtgaggcctctgctctgtattgctgcctgcgagcttgtgggt
ggcgacgaggctagtgccatgtcagcagcttgcgcggtggagatgatacacacgagctct
cttattcatgacgaccttccctgcatggacaatgctgatctccgcagaggcaagccaacc
aaccacaaggtatttggagaagacatggcagttctggcgggtgatgcactccttgctttg
gcttttgagaacatgacggtcgtgtcaagtggtttggtcgctctggagaggacggttcga
gcagtaactgagctggcaaaggccatagggatgaaagggcttgtagctgggcaaatggtt
gacctacgcagccaagggttaaatccagaggatgctggcttggagcgtctagagttcatc
caccttcacaaaacggctgcactgttggaggcatcggcagttttaggggttataatggga
agtgggacggatgaagagattaagaggcttagaaagtacgcgagatgtattgggttactg
tttcaagtggttgatgatattcttgacgtaacaaaatctactgaggaattgggtaagagc
gccgggaaagacgttatggctggaaaactaacgtatccgaggttgattggtttggagaaa
tccagggaacttgcggagacgttgagcagagaagcagaggaacagcttctagggtttgat
ccgaataaggcggcgcctctggtggctttggctagctacattgctggcagacacaactga
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