Brassica oleracea (wild cabbage): 106294039
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Entry
106294039 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: protein indeterminate-domain 6, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106294039
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106294039
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_6
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
Baculo_RING
Motif
Other DBs
NCBI-GeneID:
106294039
NCBI-ProteinID:
XP_013585107
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Position
C5:6657020..6659125
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AA seq
456 aa
AA seq
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MSSSYNNTISSSSTQSFPLLAIGANNFNREETAMTMNQRPNSVSPPPRRLRNKPGNPSPD
AEVIALTPEEIMATNRFQCEVCKKRFQREQNLQLHKRGHNLPFNLKQKSDEEVRRKVYVC
PEPTCVYHDPSRALGDLTGIKKHYYRKHGEKKFKCEKCDKCYAVESDCKAHSKICGTKEY
RCVCDTKFSRXLTIXLLRRDIHRSMRFCTYTHRSIRSGNPNLSFTEMLAAAGGNDGSSRH
GFYDGASSAVSHNHFGNNSNIGFAPLAPGHNLNRSSSQKFEDIFPQSTNPNHVPTNFPMQ
YPSNQGLLARNDQNLMNQHGLINSNNNNDNLFNPGYFQANTQNLSDQTGAPLFNHGDNNV
PPALLRGSSVAANNFGGNGNVNFQGQMNSLAATSDHQGRPGSSIFDDHRFGNNLSMGGPD
RRTLDFLGVNDRGGRNEPPLDLDIKFSDPNNPFGNV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgtacaacaatacaatttcatcatcctccactcagtctttccccctctta
gccatcggggcaaacaactttaaccgtgaagagacggcgatgacaatgaatcaacggccc
aactccgtttctccaccaccccggagactaagaaacaaaccaggaaacccaagtccagat
gctgaagtgatagccttgactcccgaagagataatggcgacgaacaggttccaatgtgaa
gtatgcaaaaaacgatttcaaagagaacagaatctccagcttcacaagagaggacacaac
cttccatttaacctgaaacaaaagtctgacgaagaagtaaggaggaaggtgtatgtttgt
ccggagcccacgtgcgtctaccatgatccgtcacgtgctctcggagacctcacaggaatc
aagaagcattattaccggaagcacggtgagaagaagtttaaatgcgagaaatgcgataag
tgttacgctgttgaatctgattgcaaagcccactctaagatttgtggtaccaaagagtat
cgatgtgtttgtgataccaaattctctaggtaattaactatataactacttcgtcgggat
atacatcgatcgatgcgtttttgtacatatacccatcgatcgatccgttcaggaaaccct
aacttgagcttcacggaaatgctagcagctgctggtggaaatgatggcagtagcagacat
ggcttttacgacggtgcttcttctgccgtctctcacaaccattttggtaacaactcaaac
attgggtttgcccctctagctccaggtcacaatctgaaccgttcatcgtcccaaaagttt
gaagacatttttcctcagtccacaaaccctaaccatgttcctactaatttccccatgcaa
tacccttcgaaccaaggactgttggcacggaacgaccagaatctcatgaaccagcacggt
ctgatcaacagcaacaacaacaatgacaacttgttcaatcccggatactttcaagccaac
actcagaacctctctgatcagacaggtgctcctcttttcaaccatggtgacaacaacgtt
cctcctgctctgcttagagggtcaagtgtggccgctaataacttcggaggcaatggtaat
gtaaactttcaaggtcaaatgaactctctagctgcgacaagtgatcatcaaggcaggccc
ggtagcagcattttcgacgaccatcgtttcggaaacaatctaagcatgggaggccctgat
aggcggactttggactttcttggcgttaatgatcgtggtggccgtaatgaacctcctttg
gaccttgacatcaagttttcagatccaaataatccattcggaaatgtttga
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