Brassica oleracea (wild cabbage): 106294048
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Entry
106294048 CDS
T04124
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106294048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106294048
03036 Chromosome and associated proteins [BR:
boe03036
]
106294048
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106294048
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106294048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
CENP-S
Motif
Other DBs
NCBI-GeneID:
106294048
NCBI-ProteinID:
XP_013585113
UniProt:
A0A0D3CKD2
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All DBs
Position
C5:complement(40599647..40607522)
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AA seq
1072 aa
AA seq
DB search
MEMDMDTSPSYFDPEVLTVRDQFRRYGKRHSTSPHEEFSSPNVSENRLLYDGHSIHSPTN
TALLLENIKEEVDNFHTDLYQGTPAVPLSASKRESAGILDGDDEASFRRVESQSLKACKI
ENDELAESGDTTFALFASLFDSALQGLMPIPDLILRLEESCRDVSQSIRYGSDIRHRVVE
DKLMRQKAQLLLGEAASWSLLWNLYGKATEEVPEELIMSPSTSHLEACQFVVNDHTAQLC
LRIVLWLEELASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKTGSTADTVRHLDFDA
PTREHARLLPDDNKQDESLLEDVWILIRAGRIEEACDLCRSAGQPWRAATLCPFSGMDMF
PSVEALIKNGKNRTLQAIELESGFGNQLRLWKWASYCASEKITEQDGGKHEVAVFANQCS
NLNRILPVCTDWEAACWAMAKSWLDVQVDLELAQSKPGLAERFRNRLDESPDTMQNGCQG
PEDWPLHVLNQQPRDLSALLQKLHSGEMVHEAVVRGCKEQHRQIQMNLMKGDISHLLDLI
WSWIAPLEDDQSNFRPHGDPQMIKFGAHVVLVLRYMLADEIKDREKLSNVGDLILHMYSM
FLFSKQHEELVGIYASQLAGHRCIELFVHMMELRMHSSVHVKYKIFLSAMEYLPFSHVDD
SQGNFEEIVDRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAIAIQWLCFTPPSTIKDVK
DVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPDTLVDY
VSDNLQEFQDWNEYYSCDAKYRNWLKFQVENAEVTDLSEEENQKAIVAAKETLDSSLLLL
LRKDNPWLTFLEDNVFESEEYMFLELHATAMLCLPSGECLRPDATICAALMSALYASVTE
QVVLDRQLMVNVSISSRDSYCIEVVLRCLATEGDGLGPHNANDGGILSAVAAAGFKGELT
RFQAGVTMDISRLDAWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVCLMESGN
PPEDHDELIELVASDETGFLSLFSQLQLQEFMLFEREYRLSQLELQEDLSSS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagatggatatggacacttctcctagctacttcgaccctgaggtcctcactgttagg
gatcagttccgtcgttatgggaagagacactctacatcgccacatgaggaattctcgagt
cccaatgtcagcgagaacagattactgtatgatgggcattccatccacagtccaacaaac
actgccttgcttcttgaaaacattaaagaagaggttgacaactttcacaccgatctttac
caaggaacacctgcagttccgctatctgcttccaagagggaaagtgctggaattctggat
ggtgatgatgaggcttcgtttcgacgagttgaaagtcagtcactgaaggcttgcaagatt
gagaatgatgagttggccgagagtggagatacgacctttgctctctttgcttccctgttt
gattctgctcttcaaggactcatgcccattccagatcttatattaagacttgaggagtca
tgcagggatgtttcacaatcaattaggtatggatcagatataagacatcgggttgtagag
gataaacttatgagacagaaggctcagcttttgcttggtgaggctgcatcctggtcactt
ctatggaacttatatggaaaagctactgaagaagttccagaggaattgattatgtcacca
tcaacatctcatttggaggcttgtcagtttgttgtaaacgaccatacagctcagctatgc
cttcggatagtcctgtggctggaagaactagcttccaaatcacttgatttggaaaggaag
gtgcggggatctcatgtgggtacctatcttcctaacgctggagtgtggcatcacacacaa
aggtacctcaaaaaaactggctctaccgctgacactgtacgccatttagactttgatgct
ccaactcgtgaacacgctcgtcttcttcctgatgacaataaacaagatgaatctcttctt
gaggatgtttggattttgataagggctgggagaatagaggaggcatgtgatctctgcagg
tccgctgggcagccatggagagctgcaacgttatgccctttttctggaatggacatgttt
ccttctgtcgaggcactgataaagaatgggaaaaataggactctccaagctatcgaactg
gaaagtggctttggcaatcagctgcgtctttggaaatgggcttcgtactgcgcatcagag
aaaatcacagagcaggatggcggcaaacatgaagttgctgtttttgcaaaccaatgtagc
aacctgaaccgcatcttaccagtttgtactgattgggaggcagcttgctgggcgatggca
aaatcatggcttgatgttcaagttgatctagaactcgctcaatcgaagccaggcttggca
gaaaggtttagaaaccgtcttgatgaaagccctgatactatgcaaaatggttgtcagggg
cccgaagattggccgctccatgttctaaaccaacaaccccgtgatctttctgctcttctt
cagaaactccattcaggggaaatggtacacgaagctgttgtcaggggatgcaaagagcag
caccggcaaatacagatgaaccttatgaagggggatatctcacatcttcttgatttaata
tggtcatggatcgcgcccttggaagatgatcaaagcaattttaggccccatggcgatcct
cagatgataaagttcggtgcccacgtggtgcttgttcttaggtatatgcttgctgatgaa
atcaaggacagggagaagctcagtaatgttggcgatcttattcttcatatgtactcgatg
ttcttattttcaaaacaacatgaagaactagtaggaatatatgcatctcagcttgctggt
caccgctgcattgaactttttgtacacatgatggagctaaggatgcatagcagcgtacat
gtgaagtacaaaatcttcctctccgctatggaatacttgccattctctcacgtggatgac
tcgcaaggaaattttgaggaaatagttgacagggttttgtcgagatcccgagaaatcaag
cttgcaaaatatgatccctcagttgatgttgcagagcagcatcgtcaacagagtctacaa
aaagccatagccattcagtggctctgttttacacctccatctactataaaggatgtcaag
gatgtcacttccaaactactcctgcgatctttgatgcacagcaacatacttttccgagag
tttgctttaattgccatgtggagggtgcctgcaactcctgtgggtgcacacacacttctt
agtttccttgctgaacctctgaagcaactctcagaaaatccagacaccctcgtggattat
gtttccgataatttgcaagagttccaagactggaatgaatattattcctgtgacgcaaaa
tatcgcaactggctcaaattccaagtagagaatgctgaagtcactgatctatcagaagag
gagaatcagaaagctatagtagcagccaaagagactctggattcttctttgttactgctc
ctcagaaaagacaatccctggctgacatttctcgaagacaatgtattcgaatcagaagaa
tatatgttccttgagttgcatgcaactgctatgctctgtttgccttctggtgaatgtttg
cgcccagatgccactatttgtgcggcattgatgagtgcgctttacgcctctgtcactgag
caagttgttttagaccgtcagttaatggtaaatgtatccatttcatcaagggacagctac
tgcatcgaggttgtgctccggtgtttagcaactgaaggtgatggacttgggccacataat
gccaatgacgggggtattttaagtgcagttgcggcagccggatttaaaggtgagcttacc
cggttccaggcaggtgttacaatggatatatcccgcctagacgcttggtattcaagcaaa
gagggctcgcttgaaacacctgcaacttatattgttcgcggtctctgtaggagatgctgt
cttccagagctcgttcttcgatctatgcaggtttctgtttgtctaatggaatcgggtaat
ccacctgaagatcacgatgaactgattgagctcgttgcttctgatgaaactggttttctg
tctttattcagtcagctacagttacaggagtttatgttgtttgagagagagtatcgtctg
tcccagttggagctccaggaggacctttcatcatcttga
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