Brassica oleracea (wild cabbage): 106294062
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Entry
106294062 CDS
T04124
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106294062
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
106294062
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Gar1
SR-25
BUD22
Motif
Other DBs
NCBI-GeneID:
106294062
NCBI-ProteinID:
XP_013585135
UniProt:
A0A0D3C7C3
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Position
C5:complement(978184..980886)
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AA seq
711 aa
AA seq
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MVGFPAKQPIEEGEELPIDQDSKVKTFKDAVDFPSIDSYLDFDSCNWLGNNPSIEEFGVE
DTDFDFFEDDMEEEEIGQGAVAVGEENQNTVLSESMFEVKPEPCGGVTEEDIEAAEPALK
ELETAVSDKSKPMEDVSASVDCPNMKKTDVSLALGLEKVSLNMGDDEAKGKSISVAESES
EASSSSSSSSSGSSSSSEEEEEESDDEDDSEEEEEKCEDEKMVIVKEDGVAGELEEGEIE
SADEVEEDSDDDDEDEVNEMIAWSNDEDDDLGLQTKDPIRSKNELKDLPPVPAVDVSLEP
HHVTLPVGVVLSVMSTQVIVEGMEQHSPLTEGSILWITERRTPLGLVDEIFGPVKCPYYI
VRFNSESEVPEGVSQGTPVSFVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDE
KEAEYRRMQKMEKRGMMMNDQKNGNARNKKKKNRDHHGSSSSLSSNRCDPQMGGPVSNHH
QPRPQMDGFPPNNGGAPWRPQSNQQNQFQLPPMANQMGMPNVGPMQMPMMGMQNQNQMMF
PPQFNGGQMPMPMPMPGGLNFFPGQGSAAPWPALNCFNQQQFGGMGRGIQHPQLPNMFAS
QGFQMQRPPQFQMQPQFQTRPQYQMMNSNRPPSPMNPQFQMQPQSEIRPQSQVPQHSPTN
QESPVQEQSQGFSNGQSSERGRGHRGGRGRGRGRGRGRFGRGRGRGRQQSG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggttgggtttccagctaaacaacctattgaagaaggagaagagctaccgatcgatcaa
gactccaaggtgaaaactttcaaggacgctgttgacttcccttccatcgactcctatctc
gatttcgattcctgcaactggcttgggaataatccgagcattgaggagtttggcgttgaa
gataccgactttgactttttcgaggacgacatggaggaggaggagatcggacaaggagct
gttgctgtcggagaggagaatcagaacacggttctgtctgagtcgatgtttgaggtaaag
cctgagccttgtggtggtgtgactgaggaggatattgaggcagctgaaccagctttgaaa
gagttggaaactgctgtttctgacaagtctaagccaatggaagatgtgtctgcgtctgtt
gattgtcccaacatgaagaaaacagatgtgagtttggctttagggttggagaaggttagt
ttgaacatgggtgatgatgaggccaaggggaaaagtattagtgttgctgagtctgagagc
gaagcctcgagctcttcttcgtctagcagtagcggtagtagtagtagcagtgaggaagaa
gaagaagagagtgatgatgaggatgatagtgaagaagaagaagagaagtgtgaagatgag
aagatggtcattgtgaaagaggatggtgtggcaggggagcttgaagagggcgagatagag
agtgcagatgaggttgaagaagatagtgatgatgacgacgaagatgaagtgaatgagatg
attgcttggagcaatgatgaggatgatgacctcggtttgcaaacaaaagaccctatacgt
tctaagaatgagctcaaggatcttcctccagttccagctgtggatgtctctctggaacct
catcatgtcacgctccctgttggagttgttctttcggtgatgagcacacaagtgatagtg
gagggaatggaacagcacagtcctttgaccgaaggttctatcctatggattactgaaaga
agaactccattgggactggtggatgagatctttggacctgtgaagtgcccttactatatc
gtgaggttcaactcagagagcgaggtgccagagggggttagccaaggcacacccgtctcc
ttcgtcgcggacttcgctcagcacattctcaacatcaaggagctgcagaagaaaggctac
gatgcgtctggagacaacgacgaggagataccagacgagcttgagttctcggatgatgag
aaagaagctgagtacagaagaatgcagaagatggagaagagagggatgatgatgaatgac
caaaagaacggtaacgcaagaaacaagaagaagaagaacagagaccaccatggatctagt
agctctctatcctcaaaccgttgtgatcctcagatgggtggtccggtttcgaatcatcat
cagccaaggcctcagatggatggttttcctccaaacaatggcggcgctccatggagaccg
cagagtaatcagcagaatcaatttcagcttcctcctatggctaatcagatgggaatgccc
aatgtaggtccaatgcagatgcctatgatgggaatgcaaaatcagaatcagatgatgttc
ccaccacagttcaatggtggtcagatgccgatgccaatgccaatgcctggtgggttgaac
ttttttccaggacagggctcagcagcgccatggcctgcattaaactgtttcaaccaacaa
cagttcggtgggatgggaaggggtattcagcatccgcagttacctaatatgtttgcttct
caaggttttcaaatgcagcggccaccacagttccagatgcaaccacagttccaaactcgc
ccgcagtaccagatgatgaacagcaacaggccaccttctccaatgaacccgcagttccaa
atgcagccacagtctgagatacggccacaatcccaagttccgcagcactcaccaactaac
caggagtccccagtgcaagaacagtctcaagggtttagcaacgggcagtcttctgaacgg
ggaaggggccaccgtggtggtcgtggcaggggtagaggtaggggtcgtggtaggtttgga
cgtggacgaggtcgtgggcggcaacagtctggatga
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