Brassica oleracea (wild cabbage): 106294090
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Entry
106294090 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase ATL15-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106294090
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106294090
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106294090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-Nse
Tmpp129
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
106294090
NCBI-ProteinID:
XP_013585158
UniProt:
A0A0D3CCF8
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All DBs
Position
C5:12112428..12113607
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AA seq
376 aa
AA seq
DB search
MVMSRLCFYSSFLLLLRFVAAQSSSYEQGTGINPTTAIVMIVLVSVFFSLGCVSVYMRRC
LEQALGIDDGRSGDPGNWLNVRQQTPRGLDASVIETFPTFRYSTVKTLRIGKEALECPVC
LNEFEDDETLRLLPQCCHVFHPGCIDAWLRSHATCPLCRANLVPVPGESVSFEISGLARE
SGQSSPLTSIVDDNRRMALASPDERLLDSVAWTGNQSMPRKSMSTGWKLAGLFSRSSSYS
QTEENLDRFTLRLPQEIHDQLVNQGSKGHIALPQVRSSIRGYRTGSLGNERNYFYFERFD
QDGRFDRRPFSITPPYRTGLIRSPSGVINGGDGYQERAGTPKSLLLAIRSPFDRLFAGKN
KVGERSYLRSGDASPV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcaagattatgcttctactcttctttcttgcttttgttacggttcgttgcc
gctcaaagcagcagctatgaacaagggacagggatcaatccaaccacggctatagtcatg
atcgtactcgtcagcgttttcttctcacttggatgtgtctccgtctacatgagaaggtgt
ctcgagcaagccctagggatcgacgacggaagatccggagacccgggaaactggcttaac
gttaggcagcagacgccgcgtggactcgacgcgtctgtcatagaaacttttccgacgttt
cgttactccaccgtgaagacgttgagaatcggcaaagaagcgttggagtgtcccgtttgc
ctcaacgagttcgaggacgacgaaacgttgcgtttgcttcctcaatgttgccacgtgttc
catcctggttgcatagatgcctggctacgttctcacgccacgtgtcctctctgccgcgct
aatctcgttcctgtaccgggtgagtctgtttctttcgagatctccggtttagctagagaa
tccggtcagagctctcctctaacgtcgattgttgatgataaccggagaatggctttggct
tctccggacgagcggttacttgactcagtggcttggacaggtaaccaaagcatgccacgt
aagtccatgtctacagggtggaaactagctggattgtttagccggtcaagttcttacagt
cagaccgaggagaatctagaccggttcacgctaagattaccgcaggagatacatgatcag
ctcgtgaaccaagggtcaaaaggccacattgcgctgccccaagtgaggagctcgatacga
gggtacagaaccggaagcctaggcaatgaaagaaactatttctactttgaacggttcgat
caagacggtcggttcgaccgaagaccgttttctataactcccccgtaccggaccggcttg
atcaggtctccgagtggggttatcaacgggggagatggttatcaggaacgtgctggtaca
cccaaaagtttgcttctagcaataaggtcaccgtttgatcggttattcgctggaaaaaac
aaagtaggtgaacgttcttaccttagatccggtgatgcgagtcctgtgtag
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