Brassica oleracea (wild cabbage): 106294404
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Entry
106294404 CDS
T04124
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9 isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106294404
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
106294404
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
106294404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
MBD
FYRN
WSD
FYRC
Phage_zn_bind_3
DUF7028
PHDvar_NSD
zf-met
Motif
Other DBs
NCBI-GeneID:
106294404
NCBI-ProteinID:
XP_013585411
UniProt:
A0A0D3CND8
LinkDB
All DBs
Position
C5:complement(46702030..46711628)
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AA seq
2159 aa
AA seq
DB search
MELTDSSKHQLGASTTAALDEEDHHPSFLGIDLNEIPTGAGCTSVHHEDGDYEPVEVVRS
IHDNPDPAPGAPADVPGPDRDAACGACGGPESVELVAVCDACERGFHLCCVNDGVEAAPS
ADWMCRECVTGGERSKLWPLGVKSKLILDMNASPPSDAEGYGGEDTSDSRKHMLASSSCM
DNSLEYSMTHSSSFKPGRGHATLEASGMMSRNIKMSVDALDSPSLRFGFPLSLSNSSFPI
RFPSVDPSELLLHNLRHFISERHGVLEDGWHVEFKQPLNDYHLCAVYCAPNGNTFSSIQD
VACYLGLAVNDNYSCMDAEIRNGSSLLQEKLHMSKRRKTSRWPNNGFPEQKGCSRTAQRR
RFPFCGQTRTTFDVSPGTLFQAGESLSSENNGCGCEEANKGLPMQFGDFFVLSLGRIDTR
QSYHNVNMIYPIGYKSCWHDKITGSLFTCEVSDGSSGPVFKITRSPCSKSFIPIGSLVLS
CPKIDEMVEQNIDNRSNRRDSPQEHDEDTVEILLSDLSPPLEDDILSCLREKNLSKTLKC
LRSEVGSSQVDFHKTSSYNQESEVDIGDIVVEEDSLSVAWKKVSQKLVDACSNVLKHKGT
MNFRCKHVDRETREINWDMINEKDSVVLYLSRFCCSLAPRIAICGKKDNSEIATLVSALS
TWLDQSRFGLDADFVQELIERMPGAESCSNYSFLKSRISSVTVAEGALVVEPKGGKNIMG
EVFGEIPRKAKRPKLNGGHGFRNPHPPPGRPMCLRLPPGRVGDFLQLSEVFWRFREILGL
GESFLPEKLEKELVNPVFDGLLLDKSGKEANRSEVNLSDKDCTVTEIFSVFDDSQPFSSE
NTSASVLKETKVGDYTELNISYSSRWPCLGALLTRTHISVLQVLICELQSKVATFVDPNF
DSGDSRSRRGRKKDDSTLSDKRNKLHMLPVNELTWPELARRYILSLLSMDGNHESAEIAA
RESGKVFRCLQGDGGLLCGSLTGVAGMEADSMLLAEASKKIFGSLTRENDVIYVEDDDSD
DLGATETNACNGDIPEWALVLEPVRKLPTNVGTRIRKCVYEALERNPPEWAKKILEHSIS
KEVYKGNASGPTKKAVLSLLADVRGGDLVQSSVKGTRKRTSIGVSDVIMKKCRAVLRGVA
AADEDKVFCTLLGRKLLNSSDNDDDGLLGSPAMVSRSLDFRTIDLRLATGAYDGSTEAFL
EDVLELWSCIRAMYADQPDCLELVETLSEKFKSLYEAEVLPLVQKLMDYRKLECTAEMKK
EIKDIVVSINKLPKAPWDEGVCKICGVDKDDDSVLLCDTCDAGYHTYCLNPPLIRIPDGN
WYCPSCVIAKRMAQDALESYKLVRQRKGRKYQGELTRAYMEQTAHLADVMKEKDYWEFSA
EERIQLLKFLCDELLSSSLVHQHLELCAEAIIEMQQKLRSLTSEWKNTKIRQEFLRAKLA
KVEPSILKEMGEPQNSSSFADHIGCSQQPQDGVVDRVTHDDDTSRAAFLNNNHGKAQLET
DAQTGVSLVTSSETNISTREKATSPGRHELPIEVTDNMSCEKEDITETLRTSAGRNDETQ
CLKPDAVELQTANDASSVASQELQACQRDLNAASNEIENLQQSIKSIEAQLLRQSIRRDF
LGSDASGRLYWGCSFPEEHPRILVDGCMSLQKPVQVDQTGSKVSSPFLRDIDHGRLMVSP
WTYYQTEAEISELVLWLHDDDLKERDLRESILCWKRLRFGNQHTEIKQAQNSSSPKLAGN
LVTKAAMSMEKRYGPCIKLETETIKKRGKKTKVSEQEKLCRCECLESILPSMIHCLICHK
TFASDDEFEEHAESKCIPYSLATEEGKEIYDSSKAKESRKPDHLSLKSNAGKEVAETSNV
SELDCGLIRYQGEESISPYHFEEICSKFVTKDSNRDLVKEIGLIGSNGIPTFLPLPSTHL
NDSMLISATSSKLDGGDSGGQVIFTGSEANGEDLNSESSMCVDRFVINGIGGPLNKPSGV
DFGLSEQKNEKASGSRLKGYCVVPQASLKRITGKALPVFRFLKTILLDMDVALPEEALRP
SKSHPDRRRAWRAFVKSAQSIFELVQAAIVVEDMIKTEYLKNEWWYWSSLSAAAKISTLS
ALSVRLFSLDAAIMYDKSVTQSDPMDETNPLPEQKSQAAQERSSRANRSGKKRKEPEGS
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atggaactcactgattcttccaaacaccaactcggagcttccacaaccgccgctctcgac
gaagaagatcatcatccctcttttctcggcatcgatctcaacgaaatccctaccggcgct
ggttgcacctctgttcaccatgaagacggagactatgagcctgttgaagtcgttaggtcg
attcacgataaccccgacccagctcccggcgcccctgccgacgtccctggccccgatcgg
gatgccgcgtgcggcgcctgtggagggcccgagtcggtggagctcgtagctgtctgcgac
gcttgtgagcgaggctttcatctctgttgtgttaacgatggagtggaggctgctccttcc
gccgattggatgtgcagagagtgtgttaccggcggcgagaggagcaagctttggccgttg
ggggtgaagtccaagctcatccttgatatgaacgcctcgcctccgagtgatgccgaggga
tacggaggcgaggatacgtcagattcgagaaagcatatgctggccagcagttcttgcatg
gacaactctcttgagtattcaatgacgcattcaagctcttttaagcctggtagaggacat
gctactctcgaagcttcaggaatgatgtctcgcaatatcaaaatgagtgtggatgcattg
gattcgccttctttacgttttggttttccattaagcctgagcaacagtagttttcccatt
agatttccatccgtggatccaagcgagctgttgctgcacaatctcaggcatttcatatct
gaaaggcacggagtattagaagatggttggcatgtcgagtttaaacaacctttaaatgac
tatcatctatgtgctgtgtattgtgctccgaatggaaacacatttagttcaatacaagat
gttgcttgttatctgggcttggcagttaatgataactatagctgtatggatgctgaaatc
aggaatggtagttctcttcttcaagaaaaattgcatatgtccaagagaagaaagacatcg
agatggccaaacaatggtttccccgagcaaaagggttgttcaaggactgctcagcgcagg
cgttttccattctgtggtcagacgaggaccactttcgacgtttcacctggtactcttttt
caggctggtgaatcgcttagctctgagaataatggatgcggttgtgaagaagctaataaa
ggacttccgatgcagtttggagatttctttgtgctgtcgcttggacgaattgacacaaga
cagtcttaccataacgtcaacatgatttatccaataggatataagtcctgctggcatgat
aagatcacggggtctttatttacatgtgaggtgtctgatggcagttctggacctgtcttc
aagattacacggtcaccatgctctaaatcatttattccaattggatcacttgtcttatcc
tgcccaaagattgatgaaatggtggaacagaacattgacaaccgaagtaatcgtagagat
agtcctcaagagcatgacgaagacactgttgagatccttctttcagatctgtccccacct
cttgaagatgatatattgtcttgtttacgtgagaagaacttatccaagacattaaagtgc
ctgcgctcggaagttggttcttctcaagtagactttcataaaacttcatcctataatcag
gagagtgaggttgatattggcgatatagttgtggaagaagattcattgtctgttgcatgg
aaaaaggtttctcaaaaacttgttgatgcatgttccaatgtcctgaagcataagggaacc
atgaacttccgttgcaagcatgtcgacagagaaacaagggaaatcaactgggatatgata
aatgagaaagacagtgtagttttatatttgtcaagattttgctgttctttggctcctcgc
attgctatatgcggtaaaaaggataatagcgagattgcaactctagttagtgctttgtca
acgtggctggatcaaagtagatttggacttgatgctgattttgtacaagaattgattgaa
cgtatgcctggtgccgaatcatgttcaaattatagttttctgaagagtagaatctcttct
gtaactgtagcagaaggtgcgctagttgtcgaaccaaaaggtggaaaaaatataatggga
gaagtttttggtgagattcctcggaaagcgaagaggcctaaactaaatggtggtcatggt
ttcagaaatccacaccctcctcccggtaggcctatgtgtctgaggcttcctcctgggcgt
gttggtgacttccttcagctatctgaagttttctggcgtttccgtgaaattttgggtttg
ggagagtctttcttacctgagaagcttgaaaaggagcttgtcaatccagtgttcgatggt
ttgcttcttgacaaatctgggaaagaagccaacagaagtgaggtgaaccttagtgataag
gattgtacagttactgaaattttttctgtgttcgatgatagtcaacccttttcttcggaa
aatacctctgcttctgtactaaaggagacaaaagtaggagattatacggagttaaacatt
tcgtattcctctcgttggccgtgcttgggtgcacttctaacaaggactcacatttcggtt
ctgcaagtgctaatatgtgagctgcaatcaaaggtagctacatttgttgatccaaacttt
gattctggagactcgcgatccagacgaggacggaaaaaggatgacagtacactttctgat
aaaagaaataagctgcatatgcttcctgttaacgagctcacttggcctgaattggcccgt
aggtacatcttgtctcttttatcaatggatgggaatcacgaatcagcagagattgctgcc
cgtgaaagtggtaaggtattccgttgcttacaaggggatggtggtttgctttgtggttca
cttactggagtggctgggatggaagccgattcgatgttacttgcagaggcttctaaaaaa
atatttggttctttgacaagagaaaatgatgttatttatgtggaagatgatgattctgac
gaccttggtgctactgagacaaacgcttgcaatggtgatattccagagtgggcactggta
ctggaacctgtgagaaaacttccaacaaatgttgggactagaatcagaaagtgtgtctac
gaggctttagagagaaatccaccagagtgggcaaagaagatattggagcattccatcagt
aaagaagtatataaaggcaatgcatccggaccaacaaagaaagctgtcctctcattgcta
gcggatgttcgaggtggagatttggtgcagagttctgttaaaggaaccagaaagaggacg
tccattggtgtatctgatgtcattatgaagaaatgtcgtgctgtattgcgtggtgttgca
gctgcagacgaggataaagtattttgcactttactggggcgaaagttactgaattccagt
gataatgatgatgacggactcctgggatcacctgcaatggtttcacgttccctagacttc
agaactatagatttgaggttggctactggtgcatatgacggatcaactgaagcttttctt
gaggatgttcttgagctatggagttgtatacgtgctatgtatgcagatcagcctgattgt
ttagaactggttgaaacattgtctgaaaagtttaagtcattatacgaagctgaggttcta
ccacttgttcagaaacttatggactacagaaaattggaatgcactgcagagatgaaaaag
gaaattaaggacatagttgtttcaataaataagcttccaaaggccccgtgggatgagggg
gtgtgtaaaatatgtggtgttgacaaagatgatgacagtgttctcttgtgtgatacatgc
gatgcggggtatcacacatattgtttgaatccacctcttattagaattccggatggaaat
tggtattgtccctcatgtgtaattgccaagcgcatggctcaagatgcgttggaatcttac
aaactagtcagacagcggaaaggtagaaagtatcagggggaacttacccgagcttatatg
gaacagacggctcacctggcagatgtgatgaaagaaaaagactactgggagttcagtgct
gaggagagaattcagctgcttaagtttctatgcgatgaactgcttagctcctcccttgtt
catcaacatctcgagctgtgtgccgaagcgataattgaaatgcagcagaagttgcgctct
cttacctcagaatggaaaaacacgaaaatacggcaagaatttctgagggctaaactcgca
aaggttgaacctagtattctaaaggaaatgggcgaaccacaaaattcaagtagctttgca
gaccacattggatgtagtcaacaaccacaagacggtgttgtagaccgggttactcatgat
gatgacacttcccgtgctgcatttcttaacaataatcacggaaaagctcagcttgagact
gatgctcaaaccggagtgtcacttgtcacttccagtgagaccaatatttccacccgagaa
aaagctacctcccctgggaggcacgagttgccgatagaagtaacggataatatgtcttgt
gaaaaagaagatattacagagaccttgcgcacatcagctggaaggaacgatgaaacacag
tgtctaaaacccgatgcagtggaattgcagacagctaatgatgcatcttctgtggcttcc
caagaattgcaggcttgtcaacgggatttgaatgccgctagcaatgaaatagagaatctg
cagcaatcaataaaaagcatagaagcacaacttctaaggcaatctatacgaagagacttt
ctaggaagtgatgctagtggtcgtttatattggggttgcagcttcccagaagaacatcct
cgtattttggttgatggatgcatgtctttgcagaaacctgtacaagttgatcagacaggt
tcaaaagtttcctccccatttctccgtgacattgaccatggaagactaatggtttcaccc
tggacctattatcaaactgaagcggagatcagcgagcttgtcctatggcttcatgacgac
gacctgaaagaaagagacctgagagagtctattttgtgctggaaaaggttacgatttggg
aatcagcatacggaaataaaacaagctcagaattcgtcctctccaaaattggctgggaat
cttgtgacgaaggctgccatgtcaatggagaagagatatggtccatgcatcaaactagag
accgaaaccataaaaaaacgggggaagaagacaaaggtttcagagcaagagaaactgtgt
agatgcgaatgcttggaatccattttgccatctatgattcactgcctcatatgccacaaa
acatttgcgagtgatgatgaatttgaggagcacgccgagagtaagtgtattccttattca
ttagcaactgaagaaggcaaggaaatttatgattcttcgaaagcaaaagagagccggaaa
cctgatcatcttagtttaaagtctaacgctggcaaagaagtagctgaaacatccaatgtt
tctgaacttgattgtgggttgataagatatcagggagaagaatctatttccccataccat
tttgaggagatctgttctaagtttgtgacaaaggattctaacagagatttggttaaagag
attggtctgatcggttcaaatggaattccaacatttcttccgttgccatctactcatctt
aacgactcaatgctcatatctgccacttccagcaagctagatggtggtgattcagggggt
caggtaatttttactggttctgaagccaatggggaagacttgaattctgaatctagcatg
tgtgtcgatagatttgtcataaatggtattggcggtccgctgaataaaccgagtggagtg
gattttggcctctcagagcaaaagaacgagaaagcttcaggtagtaggttaaaaggctac
tgtgtggttccacaggcttcgttgaaacgcattaccggcaaagctttgccggttttcagg
ttccttaaaaccatattgcttgatatggatgtggcactacctgaagaagctttaagacca
tcgaaatcacatccagaccgtagacgagcttggcgtgcatttgttaaatccgcacaaagc
attttcgagctggttcaggcagcaattgtggtagaagacatgattaagacagagtactta
aaaaatgaatggtggtactggtcttctctttcagcggctgctaaaatctcgactctatct
gcgttatccgtccgtctcttctccctggatgcagctattatgtacgacaaaagcgtaact
caatcagatccgatggatgagacaaatcccttaccggagcaaaagtcacaagctgcacaa
gaaaggagcagcagagcaaacagatctggtaagaagaggaaagaaccagagggatcataa
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integrated database retrieval system
