KEGG   Brassica oleracea (wild cabbage): 106294410
Entry
106294410         CDS       T04124                                 
Name
(RefSeq) protein TSS
  KO
K03255  protein TIF31
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:boe03012]
    106294410
Translation factors [BR:boe03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    106294410
SSDB
Motif
Pfam: TPR_12 TPR_10 eIF3_p135 TPR_NPHP3 CLU_N TPR_2 TPR_9 TPR_MalT TPR_8 CLU TPR_1
Other DBs
NCBI-GeneID: 106294410
NCBI-ProteinID: XP_013585416
LinkDB
Position
C5:299082..308724
AA seq 1777 aa
MAPKNNRGKTKGDKKKKEEKVLPVMVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFD
TSHVTNYSLSHEVRGSQLKDTVDVSALKPCVLTLTEEDYNEGTAMAHVRRLLDVVACTTC
FGPSPEKSDSVKNAQAKGGGKNPKQTETSPPPSPAPKDAVVDEAGETSHSFPKLGSFYEF
FSLAHITPPLQYVRLVAKRETEDIAADDHLLSIDVKLCNGKLVHVEGCRKGFYSVGKQRI
ICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPSAAQSPAAFPP
LPVEDERWGGDGGGQGRDGSYDLVPWANEFAFIASMPCKTAEERQLRDRKVFLLHNLFVD
VATFRAIKAVQKVMADPVLAEDSQVLYSETVGDLSVTVTRDTSNASSQVDTKIDGIQATG
LDKTKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYISVVKIEKENEKLSPPSQIVD
LLEQPEGGANALNINSLRFLLHKSSPEQNKKTHQQQDDELTSSREFVSKMLGESLVKLEE
EEIDRDNIMRWELGACWIQHLQDQKNTEKDKKQTNEKSKNELKVEGLGKPLKSLNSNKKK
TDASSPKAQQTAVSSQVDTASSEADNAAITATLQSDAEKNAQENVLVLKNLLSEAAFTRL
QESDTGLHDKSLQELVDLAQKYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMR
SLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAVATDTDKIAAKVAAALNMMLGI
PKTEAENSWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILRGLCHKVGIELIPRD
FDMESPEPFQKTDVVNLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAK
LVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATTYQQKALDINERELGLDHPDTMKSYGD
LAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYL
HKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPDDLRT
QDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHLSVSDLLDYINPSHNAKGKQSVA
AKRKSYMKLKEKSNQNVVSEQLAETPRENQKEMSEEETEATGSEDGQSSDANQETILASA
EEPPSPPVIDEATVDNSNSITSAEVSTETQHPDGSEDGWQPVHRPRSAGSYGRRLKQRRA
SIGKVYTYQKKNVEADNDNPVLQNATQPNSKYYVLKKRTASSANYGDHHSPGMTTQGTKF
GRKVVKTLAYRVKSMQPSSENPKTSAETSEEDGLKTDAFPAVPSGLSSNVQNEAYPKNSV
VSLGKSPSYKEVALAPPGSIAKYQVWAPQAEASDKQEENNSEEGTSVELTRDEQMITVSE
EEVKNEISADAESSKPQGKEEIKVELQSSEVEFKGNNLNENEESGGGIQVEEPVLEANEG
VTDMIHSTTEQEVKDQLAADSDDLKEKLGISATDSSDAPRELLLPNKKLSASAVPFNPSS
PPSIIRPTPIGMNIGPSWPVNMTLHHGPPPFPSPPATPNLMQPMSFVYPPPYTQSIPTST
YPVTSGPFHPNQFPWPHMSEFVPRTVWPACHPVEFSPPHMIAPEPIASTVLEPTVILPTD
IDTSGVEEGKQDVAATAGETMDSVNHVNAVASSEMENGNKKFEEGEKTFSILLRGRRNRK
QTLRMPISLLNRPYDSQPFKIAYSRVIRGSEAPKSAA
NT seq 5334 nt   +upstreamnt  +downstreamnt
atggctcccaagaacaaccgtggaaagacaaaaggagacaagaagaagaaggaagagaaa
gttcttccggttatggtggatgtcattgtgaaccttccggacgagacggaggctattttg
aagggcatatcaacggacaggatcatagatgttcgtcggcttttatccgttaacttcgac
accagccatgtcaccaactattctctctcccatgaggtaagaggatcgcagttaaaagac
acagtggatgtttcggcgcttaagccgtgtgttctcacgttaacagaagaggattacaat
gagggaacagcgatggcgcacgttagacggctgcttgacgtcgtcgcctgtactacttgc
ttcggtccgtcgccggagaaatccgattcggtgaaaaatgcgcaggctaagggaggtgga
aagaatcccaaacagaccgaaacgtcgcctccgccgtctcctgcgccgaaggatgcggtg
gttgatgaagccggagagactagtcactctttccctaagctcggaagcttctacgaattt
ttctctctcgctcacatcactcctcctcttcaatatgtacggctcgtggcgaagcgggaa
accgaagatatcgcggcggatgatcatcttctctccatcgatgtgaagctttgtaacggg
aagctcgttcatgtcgaaggctgcagaaaaggattctacagcgtcgggaaacaaagaatc
atatgtcacaatcttgttgatttgcttagacaaattagtagagccttcgataatgcttac
agtgatcttctgaaagcattttcggagcgcaacaagtttgggaatcttccttatgggttt
agagcaaacacatggctcatcccgccttctgcagcgcagtcaccagcagcgtttccgcct
ctccctgtcgaggatgagagatggggaggggatggtggtggtcaaggaagagacggcagc
tacgatttggttccgtgggccaacgaatttgcctttatcgcatcgatgccttgcaaaaca
gcagaggagaggcaacttagagacagaaaagtgtttctccttcacaacctcttcgttgat
gtcgccactttcagagccatcaaggctgttcagaaagtaatggctgacccagttctggct
gaagactctcaagtgctgtattccgagacagttggagacttgagtgttacggttacgagg
gatacttccaatgcaagtagccaagtggatacaaaaatcgacggaattcaagccactggt
ttggataaaacgaagctgatggaacggaaccttctcaagggacttacagctgatgagaac
actgctgctcatgatgttgctactttaggaactataagccttaagtattgtggttacatt
tctgttgtcaaaatagagaaggagaatgagaagttaagcccaccttctcaaattgttgac
ctccttgaacagcctgaaggtggtgctaatgctctaaacatcaacagtttgagattcctt
ctccataaatcctctcctgagcagaacaagaaaacacatcagcaacaggatgatgagctt
acatcttcccgagaatttgtaagtaaaatgctgggggaaagtcttgttaagcttgaggaa
gaagagatagacagggataatatcatgaggtgggaacttggagcctgttggatacagcat
ttacaagatcaaaagaatacggaaaaggacaaaaaacaaaccaacgaaaagtctaaaaat
gaactcaaggttgaagggcttgggaagccgcttaagtctctcaacagcaacaagaaaaaa
acagacgcaagcagccctaaggcgcagcagactgcagtatcatctcaggttgatacggct
tcttcagaggctgataatgctgcaataactgcaactttgcaatctgacgccgagaagaat
gctcaagaaaatgtgcttgtcctgaagaatttgttgtctgaagcagccttcactcgccta
caagagtcagatactggacttcacgacaagtctttgcaagaacttgtcgacttggcacaa
aagtattatactgaagtcgctattccgaagctggttgcagattttggttcgttggaactc
tccccagtcgatggccggactctaactgattttatgcacacaagaggtcttcggatgcgc
tctttaggatatgtcgttaagctctcagataagttgtcacatgtacagtctctgtgtgtt
catgagatgatagttagagcccttaagcatatccttcaggcggtgatttctgctgttgct
actgacactgacaaaatagctgcaaaagtagctgctgctctgaacatgatgcttgggatt
ccaaaaactgaagcggaaaactcttggaatgtgcatcctcttatcttccggtggttggag
aaattcttgaagaaacgatatgactacgatctcaatgccttcagttacaaggatctacga
aagtttgccattctccgtggattatgccataaggttggtattgagctgattccaagggat
tttgacatggagtccccagaaccgttccaaaaaacagatgtggtcaatctggtcccagtg
cataagcaagcagcatgttcgtctgctgatggaagacaacttctggagtcatctaaaaca
gcattagacaaaggaaaacttgaagatgcagttacatatggaacaaaggctcttgctaag
cttgtagcagtttgtggtccctatcacagaatgacagccggagcttacagtttacttgct
gtcgttctgtatcacactggtgattttaaccaggctactacatatcagcaaaaggcttta
gatatcaatgagagggaacttggacttgatcatccggatacaatgaagagttatggtgat
cttgctgtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgt
gcgttgtatctcttacatctaacatgtggtccatctcatccgaacactgctgctacatac
atcaatgtagccatgatggaggaaggtctaggaaatgtacatgttgccttgaggtatctt
cacaaagctctcaagtgtaatcagaggttgcttggtcctgaccatatccagactgctgct
agctaccatgccatagccattgcgctctcgttgatggaagcataccatttaagtgttcag
catgagcaaacaaccttaagaatcctccgagcaaagctgggcccagatgatttgcgtact
caggatgctgctgcttggctagaatactttgagtccaaggcttttgaacaacaggaagct
gcacgaaatggtactcctaagcctgacgcgtctatagccagcaaaggccacctaagtgta
tccgatctactcgactatatcaacccaagccataacgcaaaagggaaacagagtgtggca
gcgaagaggaagagctatatgaagctaaaggaaaaatccaatcagaacgttgtttctgaa
cagttagcagaaaccccaagggaaaatcaaaaggaaatgtctgaagaggagacagaagca
actggatcggaagatggtcaatcgagcgatgcgaatcaggagacaattcttgcatcagct
gaagaaccaccttctcctccagtcattgatgaggctactgtggataatagtaattcaatt
acatctgctgaagtttcaactgagacacaacaccctgatggtagtgaagatggatggcag
ccggtgcatagaccgagatctgctggatcatatggtcgccggctgaagcaacgacgagca
tcaattggaaaggtatatacctatcagaagaaaaatgttgaagctgataacgataaccct
gttctccagaatgctactcagccgaactccaaatactacgttctgaagaagcgtacagcg
tcctctgcaaactatggagatcatcattctcccggtatgacaactcaaggcaccaaattt
ggcaggaaggtagttaaaaccttggcatatcgggttaaatcaatgcagccgtcttctgaa
aaccccaaaacttcagctgaaacatcagaagaagatgggttgaagacagatgcttttcct
gctgtgccatctggtctgtctagtaatgtgcaaaatgaggcatacccgaaaaactctgtt
gtaagtcttggaaaatctccatcctacaaggaagtagcattggcgccacctggttccatt
gccaagtatcaagtctgggctccacaagccgaagcttcagataagcaagaggagaacaat
tctgaagagggcacatcggttgagcttacaagggatgagcagatgattacagtgtcagag
gaagaggtaaaaaatgaaatttctgcggacgcagagtctagcaaacctcaaggcaaagaa
gagatcaaagtagagttacaatcgtctgaagtggaattcaaagggaacaatctgaatgaa
aatgaagaatctggtgggggcattcaggtggaagaaccagtacttgaagctaacgaaggt
gtaaccgatatgattcattccaccacagagcaagaagtgaaagatcagctggccgctgat
tccgatgatctgaaggaaaaactgggaatctctgctacagactccagcgacgccccgcga
gagttactgttacctaacaagaagttatcagcttcagctgttccattcaacccatcatca
cctccaagtatcatacgtcctactccaataggcatgaatattggaccgtcgtggccagtg
aacatgactcttcatcacggacctcctcctttcccatcacctcctgcaactccaaatttg
atgcagcctatgtcctttgtataccctcctccttacactcaatcaatccccacaagtact
tatcctgtaaccagtggtcctttccatcccaatcagttcccatggcctcatatgtcggag
tttgtaccaagaacggtttggcccgcatgccatcccgttgagttttcccctccacacatg
atcgctcccgagccaatagcttcgactgtcttagagccaaccgtcattctaccaactgat
attgacacttcaggtgtggaagaaggcaagcaagatgtggcggcaactgcgggtgaaact
atggattctgttaatcatgtgaatgcagtggctagcagtgaaatggagaatggaaacaag
aaatttgaggaaggcgagaagacgtttagcattttgttaagaggaaggagaaacaggaaa
caaacactgagaatgccgatcagtttgcttaacaggccttatgattctcaaccgttcaag
attgcttatagcagagtcatcagaggcagcgaggctcccaagtccgcggcttga

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