KEGG   Brassica oleracea (wild cabbage): 106294489
Entry
106294489         CDS       T04124                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106294489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106294489
   04121 Ubiquitin system [BR:boe04121]
    106294489
Spliceosome [BR:boe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106294489
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106294489
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106294489
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 106294489
NCBI-ProteinID: XP_013585504
LinkDB
Position
C5:complement(39932668..39933929)
AA seq 226 aa
MSHLNIDMKKNSMRKNKKLVINIAAVKKEGLASRFETDQDLGSSIKNEKKRFESSERQRD
VFDQRIRFKANEEIDDHGSHDRSRVRDGVMREVDVGTGLSGALKLLREQGTFKEKSSSKH
HLGVRDNHGKDDRFKDAFKDIRIDRVDEFGRILTEKEAFKKLCHGFHGKRKQEKRMRKHE
DSSKNILESSDRAVERMRQGNNINASHVKTSPYRDDFFIFHEGLAM
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtctcatctcaatattgatatgaagaagaattcgatgaggaagaataagaaactggtt
attaatattgctgctgtaaagaaagaaggtctcgcttcaagatttgaaactgatcaggat
cttggttcttcaataaagaatgagaaaaagaggtttgaatcatcggagagacaaagagat
gtgtttgatcaaaggattcgtttcaaagctaatgaagagattgatgatcatggttcccat
gatcgttctagggttagagacggagtgatgcgtgaggtcgacgtcggtacaggattatct
ggggcgttaaagcttctcagagagcaaggaactttcaaggagaaaagcagcagcaagcat
catctaggtgttagagacaatcatggtaaagatgacagattcaaagatgcgtttaaggat
attaggattgatagggtggatgaatttggcaggatattgactgaaaaagaagcgtttaag
aaactttgtcatgggttccatgggaagaggaagcaagagaaacggatgaggaaacatgaa
gacagctcaaaaaatatattggagtcttcagatagagctgtggaaagaatgagacaggga
aataacatcaatgcatcccacgtcaaaacgagcccatatagagacgatttcttcatcttc
catgagggcctagctatgtag

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