KEGG   Brassica oleracea (wild cabbage): 106294560
Entry
106294560         CDS       T04124                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106294560
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106294560
Enzymes [BR:boe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106294560
Protein phosphatases and associated proteins [BR:boe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106294560
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106294560
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 106294560
NCBI-ProteinID: XP_013585603
UniProt: A0A0D3C8J4
LinkDB
Position
C5:3274284..3279790
AA seq 1131 aa
MGTELMRVCMKEESDELPSVPPGFESYASFTLKRPLPDPGAAAAKTKTPVESSVTEQANK
MEEIESDELKAARSLRRRPWINYAGCDDDDTAPNNDNASPQNLDQKKPSLPKGVTRGCAE
CNDCQKVTARWHPDEARRPDLEDAPIFYPTEEEFEDTLSYIAKIRPKAEKYGICRIVPPP
SWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKILSNQMRRKKRKCMKTGVDAVTN
GNASTETSGFETFGFEPGPGFSLNDFKKYADEFKAQYFKKSEPFCDKECRVGNSWEPGVE
DVEGEYWRIVDKATDEIEVLYGADLETGVFGSGFPKLSSSSSDEKYAKSGWNLNNFSRLP
GSLLKHEGSDISGVLIPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVAGRDAV
KLEDAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRSVQHAGEFVLTFPRAYHA
GFNCGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKADWELN
LLKKNTIDNLRWKQFSGKDGILAKTLKARIDIERTRREFLCSSSLALKMHSNFDATNERE
CCICFFDLHLSAAGCRCSPEKYTCLTHVRQLCSCPLVSKYFLFRYDIDELNVLVEAVEGK
LSAVYRWARQDLGLALSAHVSERKMEMDEEGKVHKDLSPQADVSLLLKDNEERSTPSQCM
KPVKEETVNESSVLKDSVCQPPEGGMVSVAAAKPTSGKKNSRGSVSSSKHLRIIRERPTH
VLALEAIGKTPAPNFEKQVTSLPDTRNTISSLPTNDQRAVREDVPSSVPHGEVNAVADDI
CNRVDISNQPTSSKSKISGGLAILDVVDGTRSKSSTPSNGTRSNSGTPTCSQNNSPDRII
RQKGPRIAKVVRRVKCKVEPLSYGCVLSGKSWCNRQAIFPKGFRSRVRYINILDPTNMSF
YVSEILDAGRNSPLFLVYLEGNPSEVFAHLSPTRCWEMVRERVNQEISKQHKAGRLDLPP
LQPSGSPDGFEMFGYTSPAIIQAIEALDVNRVCTEYWDSRPYSRPQVQFPANPLPREANT
SILLPTGTNSTLKVLLKKANMEELSSLQQVLSEPNIDLVTELVKEELQSRR
NT seq 3396 nt   +upstreamnt  +downstreamnt
atggggacagagctgatgagagtctgtatgaaagaagagagtgatgagttaccatctgtt
cctcctggctttgaatcatatgcttctttcactttaaaaagaccactccctgaccctggt
gctgctgctgctaaaaccaagactccagtggaaagttctgtaaccgaacaagctaataag
atggaggagattgaatccgatgaactcaaagctgctcggtctctacggcgtagaccttgg
atcaactatgccggatgtgatgatgatgacactgcacctaacaatgacaatgcctctcct
caaaatcttgatcaaaagaagccttctctaccaaagggtgtgacccggggatgtgcagaa
tgtaatgactgccagaaggtaactgcgagatggcatccagatgaagctcgtaggccagac
cttgaagacgcccctatattctacccgaccgaagaggagtttgaagacactctgagttat
atagcaaaaataagaccaaaggctgaaaagtatggaatctgccgcattgttcctcctcct
tcctggaaacccccttgccctctgaaggaaaagcaagtatgggaaggctctaaattcacc
acgcgtgtgcaaagagtggataagcttcagaaccggagttcaatgaagaagattctttct
aatcaaatgagaaggaagaaaagaaagtgcatgaagacgggagtggatgctgtcaccaac
ggcaatgcaagcacagaaacgagtggatttgagacgtttgggtttgaacctggtccaggg
ttctctctaaacgacttcaaaaagtatgctgatgagttcaaggctcagtactttaagaag
agtgaacctttttgtgataaagagtgtagagttggtaactcctgggagccaggtgttgag
gatgttgaaggtgaatattggcgtatagtagataaagcaactgacgagatagaggtgcta
tatggtgccgaccttgaaactggggtatttggtagcggattccccaagttatcatcttct
tcttcagacgaaaaatatgcaaaatcaggctggaacctaaataatttctcaaggcttcca
ggatccttgcttaagcacgagggcagtgatatctctggtgtccttataccgtggttgtat
gttgggatgtgcttttcttctttctgctggcatgttgaagatcaccacttgtattcgtta
aattacatgcactggggtgcaccaaaactgtggtacggtgttgcggggagggacgctgtt
aaactcgaggacgctatgagaaagcatctgcctgaccttttcgaagaacagcctgatttg
cttcataagctagtaacacaactctccccgtcaaaactgaaaacggcaggagtacctgtg
caccgcagcgtccagcacgctggagagtttgtgttgacgtttccccgggcgtaccacgct
ggatttaactgtggtttcaactgtgctgaagctgtgaatgtagcgccagttgactggcta
cctcatgggcagattgccattgagttatactgtcaacagggtaggaaaacgtccatctca
cacgataaattgctgcttggggctgcaagagaagtagtgaaagccgactgggagctgaac
ttactgaagaaaaatactattgacaacttgaggtggaaacagttcagcggaaaggatgga
atcttggcaaaaacactcaaggcacggattgacattgaacgtacaagaagagagtttcta
tgcagctcttcgcttgcattgaagatgcatagtaattttgatgctaccaacgagagagag
tgctgtatctgcttctttgacttgcacctttccgctgctggctgccgttgttctccagag
aagtatacgtgtttgactcatgtgaggcagctgtgttcctgtccgttggttagtaaatat
tttctgtttcgctatgatatcgatgagctgaatgttctcgttgaggctgtggaagggaaa
cttagcgctgtgtatagatgggcgcgtcaggacttaggattggctttgagtgcacacgtg
tcggaaagaaagatggagatggatgaagaagggaaagtgcacaaggacttgagtccacaa
gcagatgttagtttacttctgaaagacaatgaggagagatcaacaccaagccaatgtatg
aagcctgtcaaagaagaaactgttaatgagtcttctgttctaaaagattcagtttgccaa
ccacctgaaggaggaatggtctctgtggcagctgctaagcccactagtggtaaaaagaat
tcgcgaggttcagtttcttctagcaagcatttgagaataatacgagagagaccaacccac
gttttagcgttggaagcaattggtaaaacccctgctccaaatttcgaaaagcaagtaact
tctttgcctgatacacggaacactatatcatcattgcctactaatgaccaaagagcagtg
agagaggatgtaccgagttctgtaccgcatggagaagttaatgccgtagctgatgatata
tgtaatagagtggacattagcaatcaacctactagcagtaaatccaaaatctctggaggt
ttggctatactggatgtggttgatgggacaagaagtaaatcaagtacaccatctaatggg
acaagaagtaactcaggtacaccgacttgttcgcaaaacaatagtccggataggatcatc
cgccaaaagggtccacgtatagcaaaagttgtgaggagagttaaatgcaaagtagagcct
ttaagttatggatgtgtgctctctggaaaatcatggtgcaaccgccaagctatttttccc
aaagggtttcgaagccgggttaggtacataaatatattggatccaacaaacatgagcttc
tacgtgtcagagattcttgatgctggacgcaatagtcccttgttcttggtttacttggag
ggtaatccgagtgaggtgtttgctcacttgtcgcctacaagatgctgggagatggtgaga
gaaagagtaaaccaagagataagtaagcaacacaaagctggtagattagatcttcctcct
ctacagccttctgggagccctgacggttttgaaatgtttggatacacgtcacccgcaatc
atacaggctattgaagcattagatgtgaatcgagtttgcacagagtattgggactctagg
ccttattcgaggccacaagttcagttccctgcaaatcctcttcccagagaagccaacaca
agcatcctattgcctactggaacaaactctactctcaaagttctgctgaagaaagctaac
atggaggaactaagctcacttcagcaggttttaagcgagcctaacatagatttggtgaca
gaacttgtgaaggaagagctccagagtcgccgctga

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