KEGG   Brassica oleracea (wild cabbage): 106294638
Entry
106294638         CDS       T04124                                 
Name
(RefSeq) protein SPA1-RELATED 3-like
  KO
K26557  protein SPA1-related 3/4
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:boe00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    106294638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106294638
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    106294638
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Pkinase Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_SCAP PK_Tyr_Ser-Thr WDR90_beta-prop_4th WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 106294638
NCBI-ProteinID: XP_013585697
UniProt: A0A0D3CJY4
LinkDB
Position
C5:39427450..39431096
AA seq 802 aa
MEDSSNSNSRGFLNTSGVSDRNTEFSPLERVTPRSKPLSVFGSSAHKSSEEDSLGIDDPF
VRSLEWGDVSLRQWLDKPERCVDVFECLHVFRQIVEIVNVAHSQGIVVHNVRPSCFVMSS
FNHVSFIESASCSDSGSADSLEDGPVSHKKREDAGSYNNILERQVEKLEEEKKQPFPMKH
VLAMETSWYTSPEEEFGSTSTCASDVYRLGVLLFELFCPVPSREDKSRTMSSLRHRVLPP
QILLKCPKEASFCLWLLHPEPSCRPSMSDLLQSEFMTEPRDNLEEREAAIELRDKIEEQE
SLLEFLLMIQQRKQESAYRLRDTVSLLSSDIEQVAKRQLVLKQKGSSYSDLGFLEEPSTL
LASRKRFRQVIPPEETDDEESQGRSTFLESSRLMRNFKKLETVYFLTRRRQLKAAASGKS
LTRHSPLSSENGRGSEKSSVSNSAAPKDLSQNDSRQGGWIDPFLEGLCKYLSFSKLRVKA
DLKQGDLLNSSNLVCSLAFDRDGEFFATAGVNKKIKIFECDSIVNNNQDIHYPVVELASR
SKLSSVCWNSYIKSQIASSNFEGVVQIWDVGRSQLVTEMKEHKKRVWSINISSADPTLLA
SGSDDGTVKLWSINQGASIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKI
PLSTMVGHGKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGVNETPLHSFAGHTNLKN
FVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFSNTDSTSGLEVDDASQFISSICWR
GLSSTLVAANSNGNIKILEMVA
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggaagactcttcaaactccaactctagagggttcctcaatacctctggcgtttcagac
aggaacactgagttctcaccgctcgagagagtcacacctcgttcgaaaccgttaagcgtg
tttggtagcagcgcacacaaatccagcgaagaagattctttagggattgatgaccctttt
gttagatccttggaatggggcgatgtcagcttgagacagtggctggacaagcctgaacgg
tgcgtagacgttttcgagtgcttgcacgttttcagacaaatcgtggagattgtgaatgtg
gctcactctcaaggcattgttgttcataacgttagaccttcttgctttgtcatgtcttcg
tttaaccatgtttcattcattgagtccgcttcttgctccgactcggggtctgctgattcc
ttggaggacggtccagttagccataagaaaagagaggacgctggatcctataacaatatc
ttggagaggcaagtagagaagctagaggaagagaagaagcaaccgtttccgatgaaacat
gtgttagcgatggagacgagttggtatacaagccctgaagaggagtttggttctacgagt
acttgtgcttcagatgtctaccgtcttggtgttcttcttttcgagctgttctgtcctgtg
ccttcaagagaagacaagtcaagaaccatgtctagtttaagacatcgtgtgcttccgcct
cagatactgctcaaatgtcctaaagaagcttctttctgcttgtggctcttgcatccagag
ccaagctgtcgaccatcaatgagtgacttgctgcaaagcgagtttatgaccgaaccaaga
gataatctggaagaacgtgaagcagcaatagagcttagggacaaaatcgaggaacaggag
tcgttactcgagttcttgttgatgattcaacagagaaagcaggagtctgcttatagattg
agggatacagtttcacttctttcttcagacatcgagcaagttgcgaagagacagttagtt
ttgaagcaaaagggaagctcatactctgatctcggcttcctggaagagccttcaacatta
ttggcttcaagaaaacggtttagacaagtgattcccccagaggaaacggacgacgaggag
agtcaaggaagaagcacgtttcttgaaagctccaggttgatgagaaacttcaagaagcta
gaaaccgtctactttctgacaaggcgcaggcaactcaaagctgctgcttcggggaagtca
ttaactagacattcaccgttaagcagcgaaaacggaagaggttcggagaaaagctcagta
agcaactctgcagcaccgaaagatctttcccaaaatgattcaagacaaggagggtggata
gaccctttccttgagggtttgtgcaaatacttatcattcagtaagctcagagtgaaagca
gatctaaaacaaggagacttgttgaactctagtaaccttgtttgctcccttgcgtttgac
cgagatggagagtttttcgctactgctggtgtcaacaagaagatcaagatctttgaatgt
gattccattgttaacaataaccaggacattcactatccggttgtggagttggctagccgg
tcaaagctgagtagtgtatgctggaacagctacataaagagtcagattgcatcaagtaac
tttgaaggcgttgttcagatatgggatgttggaagaagccagttggttacagagatgaag
gagcacaagaagagagtgtggtccatcaatatttcatcagcagacccgactttgctagct
agtggaagcgatgatggaaccgttaagctatggagtatcaatcagggagctagcattgga
accatcaagacaaaggccaatgtatgttgtgtccagtttccatcagactcggggcggtct
ttagcattcggctctgcagatcacaaagtgtattactacgatcttaggaatcccaagatt
cctcttagcacaatggttggtcatggtaagacagtgagttatgtcaagtttgtggattcg
tctactcttgtgtcttcttctactgataacacgctgaagctttgggacttatccatgtct
gcctctggtgttaacgaaacgcctcttcattcatttgctggacacactaatctaaagaac
tttgttggcttatcggtctctgatgggtatatagctacaggctcagagactaacgaggtt
ttcgtgtaccacaaggcattcccaatgccggtgatgtcgtacatgttcagcaacactgac
tctacatctggtctagaagttgatgatgcctcacagttcatatcttccatctgctggcga
ggactgtcgtctaccttagtcgctgctaactccaatggcaacatcaagattctggaaatg
gtggcgtga

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