Brassica oleracea (wild cabbage): 106294672
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Entry
106294672 CDS
T04124
Name
(RefSeq) WD repeat-containing protein 44
KO
K20241
WD repeat-containing protein 44
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106294672
Membrane trafficking [BR:
boe04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106294672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_HPS5
RMC1_N
Beta-prop_NWD2_C
WDR54
Motif
Other DBs
NCBI-GeneID:
106294672
NCBI-ProteinID:
XP_013585740
UniProt:
A0A0D3CJW7
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Position
C5:39370347..39373742
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AA seq
855 aa
AA seq
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MSNHREEEEEEEEPFHDSLDRLVSSSSCSCSASNSDYDSESSPRISSHDPEEPDGGGGPR
RRHHPFPVPRFPMGASRFDLWISEPASVSERRSKLLTEMGLNREPVRSRLKPVSDSGSDI
SRSISCNQLVRRDHGDCSETVGGSASFVVRSKSDCSVSQCSDRDRLYHHPPQGNSCSCFD
SKLSHSEISITVSADSTDPLRLEGSSDCVLVDEEVEVCTIKNLDNGKQFVVNEIQEEGST
WKQVKEVGTDTQMTMEEFEMSVGHSPIVQELMRRQNVEDSDNNDNASTKTTKDDEESKYN
NNNNASKSKKKGSWFKSIKSVVTGHSKERRSSDDKDTSSERGGRRSSSATDDSQESSFHG
PERVRVRQYGKSSKELTAMYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHVWQVVE
AEKRGELLLDRPELLLLANSNGSPEPTTMSPRRRGRSSVSRKSLSLENIYVPDSVFGLSD
KPFCSFHGHLDDVLDLAWSKSQDLLSASMDKTVRLWSLSTHTCLKVFSHSDYVTCIQFNP
VDDRYFISGSLDAKVRVWSILDRQVVDWYDLHEMVTSACYTPDGQGALVGSYKGSCRLYS
ASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTNLVTKL
KGFRNTSSQISASITADGKYVVSASEDSNVYIWKYESPASRPSKSNNSSNKNVTVTNSYE
HFHSQDVSAAISWPGMASTESWGATQNRANNLDEVSTANHPPTPVDQPGTTTLDRLNSPR
NGIISSATNGYFFDRMSATWPEEKLMFGRNRSGNRLSTDLSNSGNVSASWGMVIVTAGLR
GEIRAFQNFGLPIRI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccaccgcgaggaagaggaggaggaggaggagcccttccacgactctcttgat
cgcttagtctcttcctcttcttgctcctgctccgcttccaactccgattacgactccgaa
tcctcccctcggatctcctctcatgaccccgaagagccagacggtggtggtggcccccgc
cgtcgtcaccacccattccccgtccctcggttcccaatgggcgcttcaaggttcgacctt
tggatctccgagcccgcctccgtctccgagagacgctctaagcttttaaccgaaatgggc
ctaaaccgagaaccggttcgctcccggttaaagcccgtttccgattccggttctgacatt
tctcgatcgatctcgtgtaatcagttggtccggcgagatcacggagattgctccgaaact
gtcggcggcagcgcttccttcgtcgtgagatcgaagtcagattgttccgttagccaatgc
agcgatcgtgaccgtctttatcatcatcctcctcagggtaattcatgttcttgttttgac
tctaagctctcgcattcagagatcagtataacagttagtgctgattcaactgatcccttg
cggttagaaggaagttctgattgtgtgttagtggatgaggaagtggaagtgtgtactatt
aagaatctagacaacgggaaacagtttgtggtgaacgagattcaagaagagggtagtaca
tggaaacaagtgaaggaagtggggaccgacacgcagatgacaatggaggagtttgagatg
tctgtgggacactctcccattgttcaggagcttatgagaagacagaacgtggaggattct
gataacaacgacaacgcatcaaccaaaacaacaaaggatgatgaagagagtaaatataat
aataataataatgcatcaaagtctaagaagaaaggaagctggttcaagagcatcaagagc
gttgtgactggtcacagcaaagagagacgaagcagcgatgataaagacacgtcatcggag
agaggcggccggaggtcgagctcagctacggatgactctcaggaatcttctttccacggg
ccggagagagttagggtaagacagtacgggaagtcttccaaagagctcacggcgatgtac
aagacgcaggagattcaagcgcataacggctctatctggagcattaagtttagtttggat
ggtaagtatctcgctagcgccggcgaggactgcatcattcatgtttggcaagtggttgag
gctgagaagagaggagagttgttactggatagaccggagctgttgcttttggctaatagt
aatggatctccggaaccgactactatgtcgccgaggagaagagggaggagttctgtgagt
agaaagtcgttgagtttggagaacatatatgttccagattctgtttttgggctctctgat
aaacccttttgttcctttcatggacatctggatgatgttcttgatcttgcttggtccaag
tctcaggatttgctgtctgcatcaatggataagacagttcgtttgtggagcttgtctacc
cacacttgcttgaaagtattctctcacagtgattatgtgacttgcattcaatttaatccg
gttgatgatagatacttcatcagcggttcgttagatgcaaaagttcgcgtgtggagcatt
ctggatcggcaagtagttgactggtatgatcttcacgagatggtcacttctgcttgctac
actccagacggtcagggtgcgttggttggttcatacaaaggtagctgtcgtctttacagt
gcatcagataacaagctgcaacagaaaagccagataaatttacagaacaagaagaagaaa
gctcatcagaaaaagataactggtttccagtttgtgcctggaagctcatctgaagtgcta
gtcacatcttcggactctcggatccgcgttgttgatggaactaatctagttactaaactc
aaagggtttcgaaacacgagcagccaaatctccgcctcaataacagcagacggcaaatac
gtagtgtcagcgagcgaggattcaaacgtgtacatatggaagtacgaatcccctgcttct
cgaccaagcaagagcaacaacagcagcaacaagaacgtcacagtcacaaactcttacgag
catttccacagccaagacgtctctgcagccatctcatggcccgggatggcctcaacagag
tcttggggagccacccaaaacagagccaacaacttagacgaagtctccacagctaaccat
ccacccacacctgtagaccagccagggacaacaactctggaccgactcaacagtccacgt
aacgggatcatttcgagcgccacgaacggatacttcttcgatagaatgtcagcgacttgg
cctgaggagaagctgatgtttgggaggaacagaagtgggaaccgtctgagtacggatttg
tctaactcagggaacgtgtcggcttcttgggggatggtgatagtcactgcaggtttgaga
ggagagattagagcgtttcagaactttggtttgcctataaggatttga
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