Brassica oleracea (wild cabbage): 106294689
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Entry
106294689 CDS
T04124
Name
(RefSeq) exocyst complex component SEC8
KO
K06111
exocyst complex component 4
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106294689
Membrane trafficking [BR:
boe04131
]
Exocytosis
Tethering complex
Exocyst complex
106294689
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
z-alpha
Motif
Other DBs
NCBI-GeneID:
106294689
NCBI-ProteinID:
XP_013585762
UniProt:
A0A0D3CLG5
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Position
C5:42882406..42891384
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AA seq
1055 aa
AA seq
DB search
MGTFDGLPVPSDKTYLREELARIDESWVAARFDSLPHVVHILTSKDRETDILLLREQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTDKIGDLKHDLAEAKRSLGTRNKQLHQ
LWYRSVTLRHIIALLDQIEGIAKVPSRIEKLIADRQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELAKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS
SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASTEEGSSFDGHDEEDSVEHDEATGDGQTIR
NGTDSKLLSYQLPPWLSDSSPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAII
CQRLRPTIHEIIISKIKAHMETKNLSKSACSQGDRTGAAGLHFIKGQSEAYRLSKDKPQN
GTSNSGTHLAVSPVSPLMAPGGKAQAAAKDLLDSILDTIVKIFENHVVVGELLELRASQH
DINTPKSLPTDVNWNADSEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAA
AQTAKLAKKAPKKDKRDASEDGVTFTFRFTDATVSISNQGADLIRQGWGKRAPNSSQEGY
GSAAVLPEQGMYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTM
FVDYRKGVQQAISSAAAFRPRAHTTTYTPTVEKGRPILQGLLAIELLAKEVLGWAQAMPK
FATDLVKYVQTFLERTFERCRTAYMEAVLEKLSYRLIGRHDIERLMRLDTGSACLPSQLG
HSVSHSEAVGSEVELCELFLNLPSIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQA
VPRAASQAEGNSRNQATSPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREY
LEDEDAEEPDDFVISLTSQITRRDEGMAPFISGEKRNYVFGGICGIAASASIKALADMRS
INLFGVQQICRNTIALEQAMAAIPYVDGDSVQQNLDRVRTYYELLNMPFEALLAFIAEHD
QMFTPTEYSNLLKVNVPGRDTPSDAQIRLSEILSH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggggactttcgatggtttgcctgttccctccgataaaacttaccttagggaggagctg
gcacgaatagatgagagctgggttgctgcacgctttgactctttgccacatgtggtccat
atccttacctcaaaagaccgtgaaaccgacattcttttattaagggagcaaagtgatgtt
gtcgaggaggttgttgatgaagttgtccatgcttatcatggtggtttcaacaaagccatt
caaaactactctcagatcttgcgactattcagcgagtccactgataaaataggcgacttg
aagcatgatttggcagaagcaaagaggagcttggggacacgcaataaacaattacaccag
ttgtggtaccgttctgtaacattgcggcacatcattgcgcttttggatcaaatcgagggc
attgctaaggttccatctcgtattgagaagctcattgctgataggcagttttacgctgct
attcaagtgtatctccagtcttcgctgatgcttgagcgtgaggggcttcaaacggttggt
gctcttcaagatgtcagatctgagctagctaagctgcggggtgcccttttcttcaaaatt
ctagacgatttgcatgcacatctgtacaatagaggtgaatacagttcagttgcgtcaagc
atatatgaaagagatgatgaagtaccaacaacaacagctgttgcagcaagtcgaatgagc
tcacaaccactctctcgtagaacacggacactgaaaggtgatagtcagtttggtgttaga
ggcctcacaaatggttcatatagaacggcttctactgaggaaggttcatcatttgatgga
catgatgaggaggactctgtagaacatgatgaagccaccggagatggacagactatcagg
aatggcactgatagtaaattgctttcttaccaacttccaccttggctttctgattcctct
cctgacgagtttatcgaagcagtaagaaaaagtgatgatccactgcatgtgaagtatcta
cagactcttgttcagtgtctttgcatgctcggcaaagttgcagctgctggtgctattata
tgccaaagacttcgacccacgatacatgagatcataatatccaagattaaagcccatatg
gagactaaaaatttgtcaaagtcagcctgtagtcagggtgatcgaacgggagctgcggga
ttgcattttatcaaaggacagtccgaggcctacagattatcaaaagataaaccgcaaaat
gggacatcaaattctggaactcacctggctgtgagccctgtctcgcctcttatggctcct
ggaggcaaagcgcaggctgcagcaaaagatcttcttgactcaattttagatactattgtc
aagatatttgaaaatcatgttgttgttggagagcttttggagttgagggcttcgcaacat
gacattaacacaccgaagtcattgcctactgatgtgaattggaacgccgattctgaagca
tcccaagctactggaggttacactatcagttttcctttgacagtcttacagagtgaatgc
caacaactgatatgtgaaattctaagagcaactccagaagctgcgtcagcagatgctgcg
gcacaaactgctaaacttgcaaagaaggctcccaagaaagataaaagggatgcatctgaa
gatggggtaactttcacctttcggttcacagatgcaactgtatcgatttctaatcaggga
gcggatctcattcgtcaaggctggggaaagagggctccaaattcatcacaggaaggttat
ggatctgcagcagttttgcctgaacagggaatgtatctagctgcatctatttaccggcct
gtccttcagtttacagataaaatcacttcgatgttgcccaaaaagcattctcagcttgtg
aatgatggattgcttacattcaccgagaactttgtgaaggaccacctgttaccgacaatg
tttgtggactataggaaaggcgtacagcaagctatatcaagtgctgccgcatttaggccc
cgtgcacatacaactacttacaccccaaccgtagaaaagggtcgacctatcttgcaaggt
cttttggctatagaactccttgcaaaagaggttcttggttgggctcaagccatgcctaaa
tttgctactgaccttgtgaagtatgttcagacatttcttgagagaacatttgagagatgt
cgaacagcatacatggaggctgtgctggagaagctcagttacaggctcattgggaggcat
gatattgagagattgatgcgacttgacacgggaagtgcatgtttgccatctcagcttggc
cattctgtttcgcactctgaggctgttggctccgaagtagaactctgtgaactattctta
aatttgccgtctattaagcaggataatctaattcgtgatgacaacaaactgattttgtta
gcgtcgcttagtgactcgcttgaatacgtggcagactctattgagaggcttggacaagca
gttcctcgtgcagcaagtcaagctgaaggtaatagcaggaatcaagcaacttctccaagg
aatctggcatcatttgctgatgagtacagaaaacttgccactgattgccttaaggttctt
cgtgttgagatgcaattggaaacagtctttcatcttcaggaaatgacaaatcgggaatac
ctggaggatgaggatgccgaagagccagacgactttgtgatttctcttacttcacagata
acacgtagggacgagggaatggcgcctttcatctctggtgagaagcgcaattatgttttt
ggtggcatttgtggaattgctgcaagtgcgtccattaaggctctggctgacatgagatca
atcaaccttttcggagttcaacaaatttgtagaaacactattgcattggaacaggccatg
gcagctattccatatgtcgatggtgacagtgtacagcagaacctagatcgtgtccgtact
tattatgaactactgaacatgccattcgaggcgctacttgcattcatagcggaacatgac
caaatgtttacacccacagagtattccaatctcttaaaggtcaatgttcctggaagagat
actccttcagatgctcaaatccgcctttcagaaattctttctcactag
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