Brassica oleracea (wild cabbage): 106294787
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Entry
106294787 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106294787 isoform X1
KO
K17925
sorting nexin-13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
boe04990
]
106294787
Domain-containing proteins not elsewhere classified [BR:
boe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106294787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
106294787
NCBI-ProteinID:
XP_013585900
UniProt:
A0A0D3CAF4
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Position
C5:7165955..7171054
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AA seq
1016 aa
AA seq
DB search
MSTEKQAATVRDLVEEAKKRIVILVVCVVGLSYLLSLTSSSVLVNLPAAACLIILLRYFS
LDVEMKRKSAAYNNSKPSLSLNKPPELLKAAPRSDWRSKVNSQVVEDAIDRFTRHLISEW
VLDLWYSRITADKQGPEELVFIINGVLGELSRRFRNVNLIDLLTRDLIDIICRRVEIFRE
YQGKIERKRRRSLSFEDRDSELRRLMAADDKLHPALFSPESEHKVLQHIVDRLITLTFRP
EDLHCAFFHYTVRELLACCVMRPVLNLANPRFINERIEAAVISRIKISDGSSAPRETSQS
EDLSDVSHDPFSRYLDPSVTGVELVQLKNEQQKRKNATEKQHVPDLAKDPLLSMDTRSSR
SWNSLPLPSKVVDDIKDLQEHRAGEGWGDVLDKMSQRKTETLSPEHLESVWAKGRNYRKK
EGERVPPRWSSKESCNDADDARPKDLSEGTANARGTSQHKVVNRESYLSDYSSAEEDEDQ
TKSSHSYTSEDEETVTGLNSPGTRVWDGQTNRNPVVSRIHHPLENSGRRFGKHSKGDEYY
EQAPRHQSSRKRSRRSGHILGNDDSDDSENDSLARSCSGTSATSSASYISVAGSNLPNAL
KSSLLVDSFDKLRCEVLVANIVKSSSKMFAVYSVAVTDESNHSWSIKRRFRHFEELHRRL
KVFPEYNLHLPPKHFLSTGVDIPVIQERCLLLDDYLKKLLQLPRVSGSIEVRDFLSVDSQ
TYAFSSSFSIIETLTVKHVRQTSTVSTNMANVTPGPLLSRENLSSENGKSGQHIKSNVMV
DDLKSKMKAPGNDQTKTSDSDVRNSKENGGLKKGIQRADAVAFTGLPTEWVPPKLTLPLL
DLVDVVFQLQEGGWIRRKAFWVAKQILQLGMGDALDDWVLEKIRILRRGTVVASGIQRVE
QILWPDGIFITKHPKRQQQSSSFDEEQQQEAERRAKFVRELMIEKAPATIVSLVGQKEYE
QCAEDLYFFLQSSVCLKLLAYDLVELLLTSAFPEMEQSFKQLQEEKHLFGQYTPPT
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagaagcaggctgcgacagttcgggacctggtagaggaagccaagaagcgg
atcgtaatcctggtggtatgcgtcgtcggactctcctacctcctctccctgacaagctca
tcggtattggtgaacctccctgctgctgcgtgcttgatcatcctccttcgctacttctca
ctcgatgtcgaaatgaaaagaaagtctgcagcttacaataatagcaaaccttctttatct
ctaaacaaacctcctgagctccttaaagcagctccacgctctgactggagaagcaaagtg
aactctcaggtcgttgaggatgctatagatcgcttcactcgtcacctcatttctgaatgg
gttcttgatctctggtactctcgcattacagcggataagcaaggtcctgaggaactggtg
tttattattaacggtgttctcggtgagctttcacggcggtttagaaacgtaaatctcatt
gatctgttgacgagggatctgattgatattatatgtcgtcgtgtggagattttccgtgaa
tatcaaggaaagattgagaggaaacgaaggagaagcctcagtttcgaagaccgtgactca
gaactaagacgtctgatggccgctgatgataaattgcaccctgcattgttctctcctgaa
tccgagcataaggttcttcagcatatagtggacagactcataacgctaacgtttaggcca
gaagatctacactgtgcttttttccattataccgtgagggagcttcttgcttgctgtgtg
atgcgacctgtcctaaatttagccaatcctcggtttataaatgagaggatcgaagctgct
gtgatctcaaggataaagattagtgacggttctagtgctccaagagagacttctcaatct
gaagatctctcggatgtttctcatgatcccttttctagatatctggacccctctgtcaca
ggtgttgagcttgtgcaattaaaaaatgaacagcagaaaaggaaaaatgctacagagaaa
cagcatgtaccagatttggccaaagatccattgctttcaatggacactcgatcttcccga
tcttggaactccttacccttaccttccaaagtggttgatgatattaaagatcttcaagaa
catcgagcaggagagggatggggtgatgtattagacaagatgtcacaaaggaaaactgag
acactttcgcccgagcatcttgaaagcgtgtgggcaaagggaagaaactatagaaagaag
gaaggtgagcgggtgccgccgagatggtctagcaaggaatcgtgcaacgatgctgatgat
gcacggcctaaagacttgagtgaaggcactgcaaacgcaagaggaaccagtcagcataag
gtagtaaatagagaaagttacttatcagattattcctctgctgaagaggacgaggaccaa
acaaagagtagtcattcttatacatctgaggatgaggaaacggtaacaggtctaaacagt
cctgggactcgagtctgggatggtcaaacgaacagaaatcctgttgtttcacggatacac
catccacttgaaaattctggtcgtcgtttcggtaaacacagtaaaggggatgaatattac
gagcaagcacccagacatcaatctagcaggaagagatccagacgttctggacacattcta
ggcaatgatgatagcgatgattctgaaaatgattctttggctagatcatgcagtggaaca
tctgcaacctcgtctgcatcatacatttcagtggcgggaagtaaccttcccaatgccctt
aaaagttctttgttggttgattcctttgacaaattgagatgtgaggttttggttgccaat
attgtgaagagtagttctaagatgtttgctgtgtattcagtcgctgtcacagatgaaagt
aatcatagctggtctatcaaaagaagatttcgacattttgaggagcttcaccggcgactt
aaagtgtttcccgagtacaatcttcatttaccgccaaagcatttcctatcaacaggagtg
gacatacctgttatccaagagcgatgtctactccttgatgactatctcaagaagctattg
cagctacccagagtttcaggatcgattgaagttcgggacttcctcagtgtggattcccag
acttatgcgttctcaagctccttctcgatcattgagacgctgacggttaaacatgtccgt
cagacctctacagtatctacaaatatggctaatgtgacgccgggtcctcttctttcgaga
gaaaatctgagttcagagaatgggaaatcgggtcaacatattaagagtaacgttatggtg
gatgatctgaagtcaaaaatgaaagctcctggaaatgatcagaccaagacgtctgattca
gatgtgagaaatagcaaagagaacggcggcctaaagaagggtattcaacgtgctgatgct
gtggcctttaccggcctgcccacagagtgggttcctccaaagctaacattaccccttcta
gacttggtagatgttgtctttcaactccaggagggtgggtggatcaggaggaaagctttt
tgggttgccaaacagatacttcaactggggatgggcgatgcattagacgattgggtacta
gagaaaatccgtattttgcggcggggaactgtagttgcttctggaattcaacgggttgaa
cagatactatggccggatggaatattcatcacaaaacatccaaaaaggcagcaacaatcc
agcagttttgacgaggaacagcaacaagaagcagagagacgggccaagttcgttcgtgaa
ctgatgatcgaaaaagctccagcgactattgtgagccttgtgggtcaaaaggagtatgaa
caatgtgcggaagatctctacttcttccttcagtcatcagtatgtctaaaactgttggca
tatgaccttgtggagctgttgctaacctcggcgtttccggaaatggagcagtctttcaaa
cagttgcaggaagaaaaacatctctttggtcaatacacaccaccaacctga
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