Brassica oleracea (wild cabbage): 106294886
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Entry
106294886 CDS
T04124
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI12 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106294886
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106294886
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106294886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
UBA_ARI1
zf-C3HC4
IBR_2
RING_XB3-XBAT31
Ariadne
zf-C3HC4_2
DUF4193
MsyB
Motif
Other DBs
NCBI-GeneID:
106294886
NCBI-ProteinID:
XP_013586032
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All DBs
Position
C5:2194313..2196988
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AA seq
520 aa
AA seq
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MDDSDIKRLGEILITAEEEEELNTPDEHDHTETSTHQSYVTILKEGDIRSRMKEEIQRVS
NTYSISKDDATLLLAHFRWDDIELHKNWSDNAKTVRESVGIFELERPLDLPSDDKNFYCG
ICFKIHSLERSASVSCGHRVCKFCWRSHINKRIKEIADVDWYGTLKCPYCPASFGWDMIE
SFACQEEKTKYYRYLFRSYVEGSKVIKCCPAKGRSCDVHLTPGSGNFDVLCLCLLSFCWN
CSQDTHSPMDCESAAKWLRMNSSDYQDPNWVRENTVPCPRCKLRIRENQDWSLKMRCFPP
CNYDFCWRCRGQWTEHGLDLYTCTHDEVSYEETVFGNMAEYAAGRYKDCHEKWMSNESLM
QKAKAKLQQLHTDVIPDLSNKQLATVQQLEFIAEAWSQIMECRRVLKWTYAYEYYLGEDQ
VEKQAFLKLKQDNAEIPLEKLNYLAENQLNMLLDSDGPSENFNRFRSDLTDSTRITRNHY
ELLVRDLEDGLSNVVGASTSQRARNEDDASGSSSIHDDLF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcagatatcaaaaggctgggcgagatccttattacagcggaggaggaggag
gagttgaatacacctgatgaacatgatcacaccgaaacatctacccaccagagttatgta
accattctgaaagaaggagatatccgaagtcgtatgaaagaagagatccaacgtgtttca
aatacttactcaatctccaaagacgacgccacacttctgctagcccactttcgctgggat
gatattgaacttcataagaactggtctgataacgctaaaactgttagagaaagcgtcgga
atatttgagttggagagaccacttgatttaccttctgacgacaaaaatttctattgcgga
atctgcttcaaaatacactcacttgagaggtctgcatcggtctcatgtggccatcgtgta
tgcaagttctgctggagaagtcatatcaacaaaagaatcaaagagattgcagatgttgac
tggtatgggacattaaaatgtccatattgtccagcttcctttggttgggacatgatagag
agttttgcttgccaggaagagaagactaagtactatcgatatctctttagatcttacgtt
gaaggcagcaaagtgataaaatgttgtcctgctaaggggcgtagctgcgatgttcatctt
actcctggttccggaaactttgatgtcttatgtctctgcctgcttagtttctgttggaat
tgcagccaggacactcacagtccaatggactgtgaatcagctgcaaaatggttaagaatg
aacagttctgattaccaagaccccaactgggtacgagagaacacggtgccttgccctagg
tgtaagctaaggatcagagaaaatcaagattggtcactgaagatgagatgctttccacct
tgcaactatgacttctgttggcgctgccgtggtcaatggactgaacatggcttagattta
tacacttgtacccatgatgaggtctcgtatgaagagactgtttttgggaatatggcagaa
tatgctgcaggtagatacaaagactgtcatgaaaagtggatgagtaatgaatcgttgatg
caaaaggcaaaagcaaaactccagcaactacacactgatgttattccagatttgagtaac
aaacagttagcaactgtacagcagcttgagttcattgcggaagcttggtctcagatcatg
gaatgtagaagggtcttgaaatggacttatgcttatgagtattacctaggagaggaccag
gtcgaaaagcaagctttcttgaagcttaagcaagacaatgcagagattcctctggagaag
ctcaattaccttgcagagaatcaactgaatatgttgcttgactcagatggaccatcagag
aattttaatagattccgcagcgatttaactgactcaactagaataacgagaaatcactac
gagcttcttgtaagagatcttgaagatggcttaagtaatgttgtcggtgcttcgacgtcg
caaagggcacgtaacgaggatgatgctagtggttcgagcagtatacatgatgatttattt
taa
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