Brassica oleracea (wild cabbage): 106294906 Help Entry 106294906         CDS       T04124                                  Name (RefSeq) pre-mRNA-splicing factor prp12   KO K12830   splicing factor 3B subunit 3 Organism boe  Brassica oleracea (wild cabbage) Pathway boe03040   Spliceosome Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106294906  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:boe03021]     106294906    03041 Spliceosome [BR:boe03041]     106294906    03036 Chromosome and associated proteins [BR:boe03036]     106294906 Transcription machinery [BR:boe03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      106294906 Spliceosome [BR:boe03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     106294906  Complex B     106294906  Complex C    U2 SnRNP specific factors     106294906 Chromosome and associated proteins [BR:boe03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      106294906     TFTC complex      106294906 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  106294906 NCBI-ProteinID:  XP_013586063 UniProt:  A0A0D3CL13 LinkDB All DBs Position C5:complement(41948178..41956107) Genome browser AA seq 1356 aa AA seqDB search MAAPEDESSAQSQSSSAAAAAPTPPPPPSSAGDHYLAKCVLRPSVVLQVAYGYFRSRSSR DIVFGKETCIELAVIGEDGVVESVCEQNVFGTIKDLAVIPQSNKPYSNSFQMGKDLLAVL SDSGKLSFLSFSNEMHRFSPIQHVQLSSPGNSRDQLGRMLTVDSSGLFLAVSAYHDCFAL FSLSTSSMADIILKRIFYPSEDGGKASSEQAVSGTIWSMCFISKSFNESMDYDPVLAIVL NRKGSLLNELVLLRWNVKEESVCLISEYVEAGALAHSIVEVPHSSGFAFLLRMGDALLMD LRDPQNPCCLVRTSLDFVPASLVEEQFLEESCRVQDGDDEGLFNVAACALLELRDYDPMF IDNESDNGKLSSKHVSSWTWEPEHNHNPRMIICLDDGEFFMFELRYEDDGVKVNVSECLY KGLPCKEILWVEGEFLATFAEMADGTVFKVGTEKLHWMSSIQNIAPILDFSVVDDQNEKR DQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWTVKMKLTDVYHSFLVLSFV EETRVLSVGLSFKDVTDSVGFQPDVCTLACGLVADGLLVQIHRDAIRLCMPTVDAHADGI PVSSPFFSSWFPENLSISLGAVGENLIVVSTSNPCFLSILGVKSVSSQCCVIYEIQRVTL QYEVSCISIPQKYIGKKKPRASSLDDSCSKAAIPSNMERGYTFLIGTHKPSVEVVSFSEE DGGGVRVLASGMVSLTNTMGTVISGCIPQDVRLVLVDQVYVLSGLRNGMLLRFEWPPFSH SSGHCKEEMDSVVSDLLLIATRRIGITPVFLVPFSDSLDSDIIALCDRPWLLQTARQSLS YTSISFQPSTHATPVCSSECPQGILFVAENSLHLVEMVHSRRLNAQKFHLGGTPRKVLYH SESKLLIVMRTDLYDACTSDICCVDPLSGSVLSSYKLKPGETGKSMELVRVGNEQVLVVG TSLSFGPAILPSGEAESTRGRLIILCLEHTHNSDSGSMTICSKAGSSSQRTSPFRDVVGC TTEQLSSSSLCSSPDDNSYDGIKIDESETWHLRLACATTWPGMVLAICPYLDHFFLASAG NAFYVCGFPNDSPERMKRFAVGRTRFMITSLRTYFTRIVVGDCRDGVLFYSYHEDVKKLH QIYCDPAQRLVGDCFLMDANSVAVSDRKGSIAILSCKDHSDFEYSNPESNLNLNCAYHMG EIAMAIKKGCNIYKLPADDVLRSYGLSKSIDAADDTIIAGTLLGSIFVFAPISREEYELL EAVQAKLVVHPLTAPVLGNDHKEFRGRENPSQATKILDGDMLAQFLELTNRQQESVLSTP QPSSSTLKSSSKQCSSPPLMLHQVVQLLERVHYALH NT seq 4071 nt NT seq  +upstreamnt  +downstreamnt atggcggctccggaggatgaatcttccgctcagtctcaatcttcctctgccgctgcggct gctcccactcctcctcctcctccttcctccgccggggatcattacctcgctaagtgcgtc ctccgccccagcgtcgttctccaggttgcttatggttatttccgctctcgctcctcccgc gacatagttttcggcaaggagacctgcatagagttggcggttatcggtgaagacggggtt gttgaatcggtgtgtgaacagaatgtatttggaacaatcaaggatttggctgttatacct cagagtaataaaccatactcaaatagctttcagatgggtaaagaccttttggctgttctt tctgattctggaaagctctcatttctctcatttagcaatgaaatgcataggttctcgccg atacaacatgttcaactgtctagtccaggaaattcgagggatcaacttggaagaatgctc actgtagattctagcggactttttcttgctgtcagtgcatatcatgattgttttgcgcta ttttccctctcaacatcgtctatggctgatattattcttaagaggatattttatccttct gaagacggagggaaggctagctctgaacaagcagtatctggtactatttggagcatgtgt ttcatttctaaaagttttaatgaatccatggattatgaccctgttcttgccatcgttttg aataggaaagggtctctcctgaatgagctagttttgttgagatggaatgtcaaagaggaa tccgtttgtctaatatcagagtatgtcgaagctggagctctagcacatagtattgtcgaa gttcctcactcctctggattcgcctttctgttaagaatgggtgatgcgctcttaatggat cttagggatcctcaaaacccttgctgtttggttaggacatccttagattttgttcccgcg tcattagttgaagagcagtttcttgaagagtcgtgtagagtacaagatggagacgatgag ggtctttttaatgttgctgcatgtgctttgttagagctcagggattatgatcccatgttc atagataatgaaagtgacaatggaaagttgagttccaagcatgtctcttcatggacttgg gagccggagcataatcataatccccggatgattatttgcttagatgatggcgaatttttc atgtttgaactcagatacgaagatgatggggttaaagttaatgtatcagagtgtttatac aaaggtctaccgtgcaaggaaatattatgggtggaaggtgagttcctggccacgttcgcc gaaatggctgatggaacggttttcaaagtgggaaccgagaagctgcattggatgagttcc attcaaaacatagctccgatcttggatttctcagttgtggatgaccagaacgagaaacga gaccaaatcttcgcttgctgtggcgtaacgcctgaaggatctttaagaattatccgtagt ggcattaacgtagaaaagcttttgaaaaccgcccctgtttatcaaggaatcactggtact tggactgttaaaatgaagctaactgatgtgtaccattcgtttcttgttctgtcatttgtt gaagagaccagggtcttatctgttggattaagtttcaaagatgtcactgattcagttggt ttccagcctgatgtttgcaccttggcgtgtggactcgttgccgatggtttgttggttcag attcaccgagatgcaataaggctgtgcatgcccaccgtggatgctcatgctgatggcatt cctgtttcttcaccgtttttctcctcttggtttccagaaaatctcagtatcagcttgggg gcagttggtgaaaatctgatagttgtgtccacgtctaacccttgttttctgtctattctc ggggtcaaatcagtatcatctcagtgctgcgtaatctatgagattcaacgagtaacattg cagtatgaagtctcctgcatctcaattcctcaaaaatatattggaaaaaagaaaccacgc gcttcttccctggatgatagttgtagcaaagctgcgattccttctaatatggagcgaggc tatacgtttctgattggcacacataagccttctgttgaggtcgtctccttctcagaagaa gatggtggtggtgttagagtccttgcttctgggatggtgtctctaacaaatacaatggga actgttatcagtggatgtattcctcaagatgtaagactcgtgttagttgatcaagtttat gtcctttctgggttaagaaatggaatgctgctacgttttgagtggcctcccttttcacat tcatccggtcactgtaaagaagagatggacagtgttgtgagtgaccttctgttaattgcc acccgacgtatcggcatcacacctgtttttctggttccgttcagtgattcactagattca gacatcatagctctttgtgacaggccatggttgttacaaacagctcggcaaagcctttcc tatacttccatctcattccaaccttcaacccatgcaactcctgtatgctcgtctgaatgc cctcaaggaattctttttgttgcagagaactctttacatctggtggagatggttcacagc agacgacttaatgcgcaaaagtttcaccttggaggcactccgcgaaaggttctttaccat agtgaaagcaaactattgattgtgatgagaactgatctgtatgatgcgtgcacgtctgat atatgctgtgtggacccgctaagtgggtcagtgttatcgtcctacaagctcaaacctgga gaaactggaaagtcaatggagcttgtacgtgtgggaaacgagcaggtccttgtggttggg acgagtttgtcttttggtcctgctatactacccagtggtgaagctgaaagtacaagagga cgattaatcattctctgcttagaacacactcacaactcggatagtggttcaatgacaatc tgctcaaaggctggttcatcttcccaacgcacatcgccttttcgtgatgttgtgggatgc acaacagagcaactatcaagcagtagtctctgcagcagtcctgatgataatagctatgat ggaatcaaaattgatgaatctgaaacatggcatttgagattggcctgtgcaacaacttgg cctggaatggtacttgcgatctgtccataccttgatcatttcttcctggcgtctgctggc aatgctttctatgtatgtggctttccgaacgatagtcctgagagaatgaaaaggtttgca gtgggaaggactcgtttcatgataacatctctgcgcacatacttcactagaattgttgtt ggggattgccgtgatggtgttctattctattcttatcacgaggatgtgaagaaacttcac caaatatattgtgatccagcacagcggttagttggtgattgctttctaatggatgccaac tctgttgctgtatctgatcgcaaggggagtatagctatcttgtcttgcaaagatcattca gactttgaatattcaaatccggagtccaacctgaatctaaactgtgcttatcacatgggt gagattgccatggctatcaaaaagggttgcaacatttacaaacttccagctgacgatgtg ctgcgaagttatggtcttagtaaaagcattgacgcagctgatgacactatcatagccggc accctattgggaagtatattcgtctttgctccgatttcaagggaggaatatgagctccta gaagctgtccaagcaaagctcgtggtccatcctctgactgctcctgttcttggtaatgat cataaggagttcagaggtcgagagaatccgtcccaagcgacaaagattctggatggagac atgcttgctcagttcttggagcttacaaatagacagcaggagtcagttttatcgacgcct cagccatcctcaagcacattaaaatcaagttcaaagcaatgttcttctccgcctctcatg ctacaccaagttgtacaattgctagagcgtgtccattacgctctccactag

DBGET integrated database retrieval system