KEGG   Brassica oleracea (wild cabbage): 106294991
Entry
106294991         CDS       T04124                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106294991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106294991
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106294991
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     106294991
SSDB
Other DBs
NCBI-GeneID: 106294991
NCBI-ProteinID: XP_013586186
UniProt: A0A0D3CHA5
LinkDB
Position
C5
AA seq 785 aa
MERSDSRDLYNFVRSSSDSNSKLFDASQYEFFGQNLDEMSLGGIDDDEVVAPVLGHTSPD
DDEYHLFNKGEGAGLGSLSDMDDLATTFAKLNRNVTGPKHLGVIGDRGSGSFSRESSSAT
DWTHDTELTNWLDEQDQEANRWSSQPQSSAHSQPLYRTSSYPQQPPPLQHYNSEPIIVPE
STFTSFPPPGSRSQQTSPGSLHRAPSLPSGSQMNFTPPSPLSNSRFHLSGPSHGPHYGGN
LARYASCGPTLGNVVQPHWVTDPGLLHGDHSGLLHSLAQQQQFPPRIDLMSQHMMALQQR
QSYAQLAALQSQLYRSYPSPSRKVSFGGGEVREQHKHKSSHRSRKNKGISQQASDAASQK
SESGLQFRSKYMTSEEIESILKMQHSNSHSNDPYVNDYYHQARLAKKSSGSSRAITLFYP
SQLKDHHHQPKSRNNSSEQHQQQVHVDALGKITLPYIRRPRALLEVDSSSSPGSNDQKGS
GKHLEQEPLVAARVTIEDALGVLIDIVDIDRTLQSTRPQDGGAQVKRKRQILLEGLATAL
QLADPFSKTGQKSGLTAKDDVVFLRIATLPKGRKMLTKYIQLLVPGTEIARVVCMAIFRH
LRFLFGGLPSDTLAAETIANLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRPIGSSS
GDGASVVLISLLERAAEVVVVPRAVHGSSNDGLWRASFNEFFNLLTKYCRSKYETIRRQN
QGSAADVLELAIKREMPAELLRASLRHTNDDQRNYLLNFGRKPSAVSESASHARGGQINS
ESVMG
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggagagatctgattccagggacttgtacaactttgttcgctcttcctcagattcaaat
agtaagctctttgatgcatctcagtatgagttttttgggcaaaaccttgacgaaatgtca
ttaggaggcattgacgatgacgaagtggtcgctcctgttcttggacatacttctcctgat
gatgacgagtatcacttgtttaataaaggagagggtgcaggtttagggtcattatctgac
atggatgatcttgccacgacttttgcaaagctaaatagaaatgtcacaggacccaaacac
cttggagttattggtgacagaggatctggttccttttcaagagagagttcttctgccacc
gattggactcacgatacagagctcacaaactggttggacgagcaagatcaagaggctaac
agatggtcctcgcagccacagtcatctgctcattcacaacctttatacaggacatcctct
taccctcagcagccaccaccgttgcaacactacaatagtgaaccaatcattgtaccagaa
tcaactttcacctcctttcccccgccaggcagcagatctcagcagacttcacctggaagc
ctccaccgcgctccttctcttcccagcggttctcagatgaatttcaccccaccttccccg
ctgtcaaactctagatttcatctttcaggaccctcacacgggcctcactatggtggtaat
ttggctagatatgcctcgtgtggtcctacccttggtaacgttgtgcaacctcattgggtc
actgatcctggtcttctccacggagatcattctggtttattacatagtctggcgcaacaa
caacaattccctcctcgaattgatcttatgtcgcaacatatgatggctctccagcagaga
caatcgtatgctcagcttgcagcgctacagtctcagctgtacaggtcttatccatcacca
tcacgtaaagtctcttttgggggtggtgaagttagggaacaacacaagcataagtcttct
cataggagtcgaaagaacaaaggcatatctcaacaggcatcagacgcagctagtcagaaa
agcgagagtggattgcagtttagatcaaagtacatgacttcagaggaaatagagagtata
ctcaagatgcagcactctaattcacacagcaacgatccttatgtcaatgattattaccac
caagctcgccttgccaagaagtcttctggatctagtagagcaatcactctcttctaccct
tctcagttgaaagaccaccaccaccaacctaagtcccgtaataatagttctgaacagcat
caacaacaagttcatgtagatgctcttgggaagatcacgcttccctatattcgcaggcca
cgtgccttgcttgaggttgactcttcttcttctcctggttctaatgatcaaaagggctca
gggaaacatttggagcaggaaccacttgtggcagctagggttacaattgaagatgctcta
ggagttcttatcgacatagttgacattgacaggactctccagtccacaaggcctcaagac
ggaggcgctcaggtgaagagaaaacgccagatcctccttgaaggtctagcgacggcactt
cagcttgctgatccgttcagcaaaaccggtcagaagtcagggctgactgctaaggatgat
gttgtgtttctgcgtatagcaactcttccaaagggtcggaaaatgcttacgaagtacata
cagcttctagttccaggcactgagattgctcgagttgtctgtatggctatattccgccac
ttgaggtttctcttcggcggcttgccttcggatactctagcagcagagacgattgctaat
cttgccaaggcagtcacggtctgtgttcaagctatggacctccgagcgctgagtgcttgc
cttgcagctgtggtttgttcttcagagcagccacctctgcgtcctattggaagctcttct
ggggatggtgcttcggttgtcttgatatcacttctcgagagagctgctgaagtagtggtg
gttcctcgagccgtccatgggagctctaatgatggcctatggagagcctcgtttaatgag
ttcttcaacctgcttactaaatactgcaggagcaagtatgagacgatccgtaggcagaac
caagggagtgcagcggatgttttggagctggcgataaagagagaaatgcccgctgagctt
ttacgtgcgagcctccgtcataccaatgacgaccagaggaactatttgttaaactttggt
cgtaaaccgtcggccgttagtgagtctgcgtcgcatgcaaggggtggtcagatcaactct
gaatctgtgatgggttga

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