Brassica oleracea (wild cabbage): 106295046
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Entry
106295046 CDS
T04124
Name
(RefSeq) transcription initiation factor IIE subunit alpha isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106295046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106295046
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
106295046
Prokaryotic type
Archaeal type
TFE
106295046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
MarR
DUF6396
wHTH-PRTase_assc
Zn_ribbon_8
DZR
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
106295046
NCBI-ProteinID:
XP_013586271
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All DBs
Position
C5:915368..918862
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AA seq
477 aa
AA seq
DB search
MDNKGPVLKTVVLEPFIKLVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRK
QWVREEDLAKELKLHAKQLRKIIRHFEEQNLIMRDHRKETAKGAKMYSVAVAATTGGRAE
DKVKFHTHSYCCLNYPQIYDIVRYKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMEDDAFHCENCNGELVVECNKLTSEEVADGDDNARRRRREKLRDMLQKMEVQIKP
LMDQINRVKDLPVPDFGSLIAWEARAAIAARENGELNPNDPLRSQGGYGSTPMPFLGETK
VEVNLGEGKEDVTSNGGDSSLKVLPPWMIKQGMNLTEEQRGEMRHEAKVDVGSSKLSDDK
KSAMESGDDKDLLKDEYFKAYYAALIQQQQDLAQKQRREESGGEVVAPDSELASTSSDRQ
VGMKSKREEEEDEWEEEVAPVPVAGNGNYKVDLNVEAAEASGGEEEEEEEDIDWEEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggataacaagggcccagtgctgaaaacagtcgtgctcgagccctttatcaagttggtg
aggcttctagcaagggctttctatgatgattatactaccaaaagcgataaccagcagaaa
actgcaaggagtgacaacagagggattgccgttgtggtcctggatgagcttaccaggaag
caatgggttagagaagaggacttggctaaagagttgaagttgcacgccaagcagcttaga
aaaataatacgacactttgaagaacagaacttgatcatgcgtgaccacaggaaagagact
gcaaaaggtgcgaagatgtatagtgttgcagtagctgctacaactggtggtcgagcagag
gacaaggttaagttccatacccactcgtattgctgcctcaattatccacagatatatgat
atcgttcgctataaactgcaccggatgaaaaagaagctcaaagatgaactagaagataag
aatactgttcaggagtatggctgtcctaactgccaaagaaaatataatgcactggatgcc
ttgagattaatttctatggaagacgatgcgtttcactgcgaaaactgcaatggtgaattg
gtcgtggaatgtaacaagctaacttcagaagaagtagcagatggagatgataatgcaagg
agacggcggcgggaaaaactaagagatatgcttcagaagatggaggttcaaataaaacct
ctgatggatcaaattaacagagtaaaagacctgccagttcccgactttggatctcttatc
gcatgggaggctcgtgcagctattgctgctcgtgaaaatggcgagcttaaccctaacgat
cctttgagatcacagggtgggtatggttcaacaccaatgccgtttctcggagagacgaag
gttgaggttaaccttggtgaaggaaaagaggatgtcacgtccaacggtggagattctagt
ctgaaagtcttgcctccatggatgataaagcaaggaatgaatctgacggaggaacaaaga
ggagagatgagacatgaagcaaaagttgatgtcggctcatcgaaactttcagatgacaag
aagtcagccatggaaagtggcgatgataaagatttgttgaaggatgagtatttcaaagct
tactacgctgctctgatacagcagcagcaagatctagcacagaagcagagacgagaagaa
tctggaggtgaagtagtagcccctgacagtgagttggcttcgacatcctcagatcgtcag
gttggtatgaagtccaaacgcgaagaggaagaagatgaatgggaagaagaagtggctcca
gttccagttgcaggaaatggaaactacaaggtggacttgaatgtggaagcagcagaggct
tcaggtggtgaagaagaagaagaggaagaagacatcgactgggaagaaggctga
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integrated database retrieval system
