KEGG   Brassica oleracea (wild cabbage): 106295050
Entry
106295050         CDS       T04124                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106295050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106295050
   03036 Chromosome and associated proteins [BR:boe03036]
    106295050
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     106295050
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    106295050
   PBAF complex
    106295050
   GBAF(ncBAF) complex
    106295050
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 DUF7685 SANT_DAMP1_like
Other DBs
NCBI-GeneID: 106295050
NCBI-ProteinID: XP_013586277
UniProt: A0A0D3CC66
LinkDB
Position
C5:complement(11344212..11347985)
AA seq 771 aa
MPASEDRRGKWKRRKRGGRRPKQEEEDMEEEHEDNNNEEMEDADNADELHQNGGATPDPG
PGVNEVVEDSGTRISDFPSVVRRVVIRPHASVTAVVAAERAGLIGESRGQGSLPSLENIS
YGQLQALSTVPADSVSLDTERSDGASSAYVISPPLIMEGEGVVKRFGDKVHVLPMHSAWF
APNTVDRLERQVVPQFFSGKSPHHTPESYMHFRNAIVSKYTDNPEKTLTISDCQGLVDGV
DDEDFARVFRFLDHWGIINYCATSQCHPEPSRDISDVREDSNGEVHVPSAALTSIESLIK
FDKPSCGHKSDSSVSCSDVDLPDLDIRIREHLCDNHCNHCSRPLPTVYFQSQKKEDVLLC
SDCFHHARFVAGHSCIDFVRVDTTKQYGDQDGENWSDQETLLLLEAVELYNENWVQIADH
VGSKSKAQCILHFLRLPVEDGLLDNVELPGVAYPANPTNGYDHKGTDSNGALPGSSEQES
ETEINLPFVKSPNPVMALVAFLASAVGPRVASSCAHESLMVLSADDRFKSEGKDPSLIDE
TTCQNGAEAPTPLPQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRME
LKLKQFAEIETLLMKECEQVEKTRQRFAAERARMVSARFGSPGQTSNTNNLQGMSLSTGG
GNNINTLLQQQQGSASSSQPSIIPGFSNNPQLHAQMQFMARQQQQQQAFSFGPRLPLNAI
QTNAGSTPSLFGNNQLNNNPAGSASINQPPFSHPMVRSSTGSGSGSGLGLN
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgccagcttctgaagatagaagagggaaatggaaacggcggaagcgaggtgggaggaga
ccgaagcaagaggaggaagacatggaggaagaacacgaggacaacaacaacgaagagatg
gaggatgctgataatgccgatgagcttcaccaaaacggcggcgcaacgcccgatccggga
cccggtgttaacgaggtagtcgaagattccggtactcgcatctctgatttcccctcagtg
gtcaggcgcgtggtgatccggccacacgcctctgtaacggctgttgtggcggctgagaga
gctgggttgattggggagagtagagggcaaggctcgcttccatctctggagaacatttcg
tatgggcagttgcaggcattgtctactgtgccagctgattctgtgtcgcttgatactgag
aggagtgatggagcgtcttcggcttatgttatctctccacctcttattatggaaggagaa
ggagttgttaaacggtttggggataaggttcatgtcttgcctatgcattcagcttggttt
gcaccaaacacagtggatcggcttgagaggcaagtggtgccacagttcttctccggaaaa
tctccacatcatacaccagaaagttatatgcacttcaggaacgctattgtctcaaaatac
acggataaccctgaaaagacactgacgatatctgattgccaaggattggtagatggtgtc
gacgatgaagattttgcacgagtgttccgttttcttgatcactggggaataatcaattac
tgcgccacttcccagtgtcatcctgagccttctagggatatttcagatgttagggaggat
tcaaacggtgaagtccatgtgccatctgctgctttaacatctattgagagtttgatcaaa
tttgacaagcccagctgtggacacaagtcagattcatccgtgtcatgttcggatgttgac
ctccctgacttggacataagaattcgtgaacacctatgcgataaccattgcaaccattgt
tctcgaccgcttccaactgtgtacttccaatcacaaaagaaggaggatgtgcttttatgc
tctgattgttttcaccatgcaagatttgttgctggacattcttgtattgactttgtaagg
gtggatacgaccaaacagtacggcgatcaagatggagagaattggagtgatcaggaaact
ctattgcttctcgaagctgtggaactctacaatgaaaactgggttcagattgcggaccat
gttggttccaagtcaaaagctcaatgcattcttcattttcttcgattacctgtggaggat
ggtcttttggataacgttgagcttccaggtgtagcttacccggcaaaccctacaaatgga
tatgaccataaaggaacagattcaaatggggctttaccaggatcttctgagcaagaatct
gaaactgagatcaatcttcctttcgtgaagtctcctaatccggttatggcattggtagca
tttttggcatcagcagttggacctagagttgcttcgtcctgtgcccatgagtccctcatg
gttttatccgcggatgataggttcaaatctgaaggaaaagatcccagcttgattgatgaa
acaacatgccaaaacggagcggaagcaccgactcctctgccacaggacaaggttatggca
gcatttagagccggtctatcagctgcagcaaccaaagcaaagttgtttgctgatcatgag
gaacgtgaaatccaaaggctttctgcaaatatcgtaaatcatcagctgaagaggatggag
ctgaagctaaagcagtttgcagaaatcgaaacgttgttgatgaaagaatgcgaacaagtg
gagaaaacccgtcagagatttgctgcagaacgagcacgtatggtctcagcaagatttgga
tcacctggacagactagtaacactaataatctccaagggatgtctctatccactggtggt
ggtaacaacatcaatactctcctccaacagcaacaaggttcagcttcctcttctcaacca
agcatcatcccaggattcagcaacaacccacaacttcatgcgcagatgcagttcatggca
cgccagcaacaacaacagcaagcattctcctttggcccgagattgcctctcaatgctata
cagaccaatgcaggatcaacgccttcactgtttggcaacaaccaacttaataataaccct
gcaggttcagcatccatcaaccaacctccatttagtcacccgatggttaggtcttctact
ggttctggatccgggtctggcttagggttaaactaa

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