KEGG   Brassica oleracea (wild cabbage): 106295059
Entry
106295059         CDS       T04124                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106295059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106295059
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106295059
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106295059
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 106295059
NCBI-ProteinID: XP_013586289
UniProt: A0A0D3CKD5
LinkDB
Position
C5:complement(40613219..40614742)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ
YCDIPLGLYVIRGENVVLIGDLDTEREELPPNMIRVSETEIKRAQKVEREASELRGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggctggtcctgaagatatttacctttcaacttcactcgctagttatctcgat
agaaagatacttgtgctccttagagatggtagaaagctaatgggaaccctccgttcattt
gaccaattcgccaatgcggttctagaaggtgcttgcgagagggtgattgttggtgagcaa
tactgtgatattcctttaggcctctatgtaatccgtggagagaatgttgttctgattggt
gacctggacacggagagagaggagcttcctccaaatatgattcgtgtctcagagactgag
attaaaagggcgcaaaaggtggagagggaagcgagtgagctgagaggaacaatgaggaag
agaatggagtttcttgacttcgattaa

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