Brassica oleracea (wild cabbage): 106295143
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Entry
106295143 CDS
T04124
Name
(RefSeq) eukaryotic initiation factor 4A-1-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106295143
03012 Translation factors [BR:
boe03012
]
106295143
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106295143
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106295143
mRNA cycle factors
Stress granule specific factors
106295143
Translation factors [BR:
boe03012
]
Eukaryotic type
Initiation factors
eIF-4
106295143
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106295143
Exosomal proteins of bladder cancer cells
106295143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
106295143
NCBI-ProteinID:
XP_013586404
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All DBs
Position
C5:40729872..40732503
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AA seq
412 aa
AA seq
DB search
MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLLQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
YIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRG
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatccgcaccagaaggcactcagtttgatgcacgtcagttcgaccagaagttg
aacgaagttcttgagggacaggacgagttcttcacctcttacgatgaatcccacgacagc
tttgacgccatgggtctccaagagaatctcctcaggggtatctacgcttacggtttcgag
aagccttctgctatccagcaaagaggaatcgttcccttttgcaaaggcctcgacgtgatc
caacaggcccagtccggtaccggcaaaaccgccactttctgctccggcgtcctccagcag
ctagactactccctcctccagtgccaggccctcgtcctcgccccgaccagagagctcgcc
cagcagatcgagaaggtcatgagggccctcggcgactacctcggcgtcaaggtccacgcc
tgcgtcggcgggaccagcgtccgcgaggaccagcgcatcctccaggccggcgtccacgtc
gtcgtcggcaccccggggcgcgtgttcgacatgctgaagcgccagtccctccgcgccgac
tacatcaagatgttcgtcctcgacgaggccgacgagatgctctcccgcgggttcaaggac
cagatctacgacatcttccagctcctcccgcccaagatccaggtgggtgtcttctcggcg
accatgccgccggaggctctcgagatcacgaggaagttcatgagcaagccggtgaggatc
ctggtgaagcgcgacgagctcaccttggaaggtatcaagcagttttacgtcaacgttgag
aaggaggagtggaagctcgagacgctctgcgacctctacgagacgctggccatcactcag
agcgtcatcttcgtgaacaccaggcggaaggttgactggctcactgataaaatgaggggg
cgtgaccacacggtgtctgcgactcacggagacatggaccagaacactagagacattatt
atgagagagttcaggtctggctcctcgcgtgtgcttatcaccactgatctcttggctcgt
ggtatcgatgttcagcaggtgtctctggtgatcaactacgatctgccgactcagcctgag
aactaccttcaccgtatcggaagaagtgggaggtttgggaggaaaggtgtggcgatcaac
ttcgtgacgaaggatgatgagaggatgctgtttgatattcagaagttttacaacgtggtt
gttgaggagctgccttcgaacgttgctgatctgctgtga
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