KEGG   Brassica oleracea (wild cabbage): 106295191
Entry
106295191         CDS       T04124                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106295191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106295191
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106295191
 Complex B
    106295191
 Complex C
   U2 SnRNP specific factors
    106295191
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 106295191
NCBI-ProteinID: XP_013586480
UniProt: A0A0D3CA72
LinkDB
Position
C5:6719555..6722434
AA seq 780 aa
MFSSSQILPLEAPPTDGNLGPLPPSQLTDQEAEEKELQSSSNQAPESVATHTRTIGIIHP
PPDIRSIVEKTAQFVSKNGLEFEKRIIASNAKNAKFNFLTSSDPYHAFYQHKLAEYRAQN
QDGAQGDDTDGPDGASLQLDGGDGDGEAGEAQADLQAQFRVPPKPLEPPEPEKYTVRLPE
GITGEELEYIKLTAQFVARNGKSFLTGLQSRESNNPQFHFMKPTHSLFSFFTALVDAYFD
VLKPPEDLKEKLRKSATDLTTVLERCLHRLEWDRSQEQQRKKEEDEKEQERVQMAMIDWH
DFVVVESIDFADEEDDELPPPMTLEEVIRRSKVSSAMEEDEVVEPGKEVEMEMDEEEVRL
VAEGMRAANLEANGGSVKIETLNDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL
IPISEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE
EEVSNAVKAEIEKKKDEQPSQVIWDGHTGSIGRTANQALAQNANGEEQYGDPNSFPGPAA
LPPPRPGVPIVRPLPPPPNLALNVPRPPPSVQYPGPPRPLGVPMVQPMHPQHQLSMPGPP
GHQPMMMNRPPQMQHGMPVPPPPGSQFAHLQVPRPYGQLPPTMHGMMQPPPMHGMPPPPP
HEEAPPPLPEEPEPKRQKFDESALVPEEQFLAQHPGSATIRVSVPNVDIGQVIEITVQSL
SENVGSLKEKIAGETQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgttcagttcgtcgcagatactcccactcgaggctcctcccaccgacggcaacctcggt
ccgcttcctccttcgcagctaacggatcaggaagccgaagagaaagagcttcaaagcagc
tcaaaccaagctccggagtctgtagccactcacacgaggaccatcggaatcattcaccct
cctccggatatcagaagtattgtagagaagactgctcagttcgtctccaagaacggtttg
gagttcgagaagaggatcatcgccagcaatgccaagaacgctaagttcaactttttgacg
agttcagatccttatcacgccttttaccagcacaagcttgctgagtaccgtgctcagaat
caagatggagctcagggtgatgatactgacggtcctgatggtgcaagtcttcagcttgat
ggtggtgatggtgatggtgaagcaggtgaggcacaggcggaccttcaggctcagtttcgg
gttccccctaagcctcttgagcctcctgagcctgagaagtatacagttagacttcctgaa
gggattacaggggaggagcttgagtatattaagctcactgcacagtttgtggcaaggaat
gggaagtctttcttgactgggttgcagagtagagagagtaacaatcctcagtttcatttt
atgaagccaactcatagtttgttctcttttttcactgctctggttgatgcgtactttgat
gtgctaaagcctcctgaagacttgaaggagaagctgaggaagagcgctactgatttgact
actgttcttgagcgctgtttgcatcgtcttgaatgggatcgttctcaggagcagcagagg
aagaaggaagaggacgagaaagagcaggagagagtgcagatggctatgattgattggcat
gacttcgtggttgttgaatcgattgattttgccgacgaggaggacgatgagttgccaccg
cctatgacgctcgaggaagtcataaggaggagcaaagtatcatcagcgatggaggaagat
gaagttgtggagcctggaaaggaagtcgagatggaaatggatgaagaagaagtcaggctt
gttgcggaaggaatgagagcagcgaacttggaagcgaatggtggctctgtaaagattgaa
actttgaacgatgaggaagcacctatgaggattgttaagaactggaagaggccagaagat
aggatcccgacagagagagatcctactaaagttgttatatctccaattactggcgagctg
attcctattagcgagatgtctgagcacatgcggatttcgcttattgatcctaagttcaaa
gagcagaaggatcggatgtttgctaagattcgcgagactactcttgcacaagacgacgag
attgctaagaacatagtcgggcttgctcgtctgcgtcctgatattttcgggacaacagaa
gaagaagtctcaaatgctgtaaaagcagagattgagaagaagaaagatgagcagccaagt
caagtaatatgggatggtcacacaggaagtataggtcgcacagcaaaccaagccttggct
cagaatgctaatggagaggagcaatatggagatccaaatagcttccctggtccagctgct
cttcctcctcctcgaccaggcgtcccaatagtcaggccattgccaccacctcccaatctc
gccttgaacgtgcctcgccctcctccgtctgttcaataccccggtccgcccaggccatta
ggtgttccaatggtgcaacccatgcatccacaacaccagctctcgatgcctgggccacct
ggacaccagccgatgatgatgaaccggcctccacaaatgcagcatggcatgcctgtgccg
cctccaccgggatcacaatttgctcatcttcaagttccaagaccatatggtcagcttcca
ccaactatgcatgggatgatgcaaccaccacctatgcatgggatgccgcctccaccacca
catgaggaggcaccgccgcctcttcctgaggagccagagccaaagagacaaaaattcgac
gagtcggctcttgttccagaagaacagttccttgctcagcatccgggttctgctacgatc
agggtctctgttccaaacgtggacattgggcaagtcattgagatcacagtgcagtcatta
tccgaaaacgttggaagtttgaaagagaagatagctggtgaaacacaaattccagcaaac
aaacagaagttgagtggaaaagctgggttcttaaaggacaacatgtcgctggcacattac
aatgtcggagcaggagaaatcttaacactgtctttgagagaacgtggtgggaggaagaga
tag

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