Brassica oleracea (wild cabbage): 106295239
Help
Entry
106295239 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-9
KO
K10357
myosin V
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106295239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106295239
04131 Membrane trafficking [BR:
boe04131
]
106295239
03029 Mitochondrial biogenesis [BR:
boe03029
]
106295239
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
boe04812
]
106295239
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106295239
mRNA cycle factors
P-body specific factors
106295239
Membrane trafficking [BR:
boe04131
]
Others
Actin-binding proteins
Myosins
106295239
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106295239
Cytoskeleton proteins [BR:
boe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106295239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_16
TPR_MLP1_2
nSTAND3
AAA_22
EzrA
CbiA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106295239
NCBI-ProteinID:
XP_013586543
LinkDB
All DBs
Position
C5:3343498..3351698
Genome browser
AA seq
1477 aa
AA seq
DB search
MGTPVNIIVGSHVWVEDSDVDWIDGEVEKINGEEVVIQATTGKKVTAKLSKIYPKDEEAP
AAGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQY
KGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRA
VTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCYELVGISDAHDYL
ATRRAMDIVGISEKEQEAIFRVVAAILHIXNIDFTKGKEVDSSVPKDDKSKFHLKTAAEL
LMCDLKALEDALCKRVMVTPEEVIKRSLDPQSAVTGRDGFAKTVYSRLFDWLVDKINKSI
GQDANSRSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAID
WSYIEFVDNQDVLDLIEKKPGGIVALLDKACMFPKSTHETFANKLYQTFKAHKRFIKPKL
SRTDFTVAHYAGEVLYQSDLFLDKNKDYVIPEHQDLLGASKCPFVVGLFPPLPEETSKSS
KFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAI
RISCAGYPTRKPFFEFINRFGLLYPEALEGSYDEKVACKKILDSMGLKGYQIGKTKVFLR
AGQMAELDARRTEVLSGAAKKIQRRTRTHQAQKRFIVLRKATISLQALCRARLSCKLFEN
LRREAAAVKIQKNGRRYYSRKSYKKLHVSALSVQTGLRAMAARKQFRFRKQTKAATIVQA
QWRCHRATTYYKKLKNGVIISQTRWRGRLAKRELKKLKMASRETGAFKEAKDMLEKKVEE
LTYRAQLEKRLRGDLEEAKTQEITKLQSSLEEMKKKVDETNALLVKEREAAKKAAEEAPP
VIQETQVLVEDTKKIELMTEELESVKATLENEKQRADDAVRKFEEAQESLDEKKKKLEET
EKKGQQLQESLTRMEEKCTNLESENKVLRQQAVSMAPNKFLSGRSRSILQRGSESGHLAV
DTRSSLDLHSNSMNHRDPSEVNDKPQKTLNEKQQENHELLIRCIVQPLGFKGNRPITACI
IYKCLLQWRSFEVERTSVFDRIIQAIGHAIESQDNNNTLAYWLSNASTLLLLLQRTLKAS
GAAGMAPQRRRSSSASLFGRMTQSFRGTPQGVNFAMINGGAGGGADTLRQVEAKYPALLF
KQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSVANTPAHEALIA
HWQGIVKSLTNFLDTLKSNNVPSFLVCKVFTQIFSFVNVQLFNSLLLRRECCSFSNGEYV
RAGLCELENWCFKATDEYAGTSWEELKHIRQAIGFLVIHQKPKKTLDEISHDLCPKTRTM
LLATLSFWMTTQAFHSRLMIYQSRWRDLTLLISNRHL
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggggactccagtaaatatcattgtaggttctcatgtttgggttgaagactcagacgtg
gattggattgatggggaggttgaaaagatcaatggagaagaagttgtgatccaagccaca
accggaaagaaggtcactgcaaagttgtcaaagatatacccaaaggatgaggaagctcct
gcagccggtgttgatgacatgacaaagctgtcttacttgcatgaacctggtgtccttcag
aacttaaagatcagatatgagcttaatgagatctatacatacacaggaaacatccttatc
gctattaatccatttcaacgcttgcctcacatctatgatgctcatatgatgcaacaatac
aaaggagcaccgttcggagaactaagtccacatgtttttgctgttgctgatgttgcatac
agggctatgattaatgaggggaaaagcaattcgattcttgtaagtggcgagagtggagca
ggaaaaactgaaaccactaagatgcttatgagataccttgcatatttgggaggtcgtgct
gttacagaaggaaggaccgttgaacaacaagttcttgaatcaaatcctgtacttgaagct
tttggtaatgcaaaaactgtaaggaataacaactcaagtcgctttggtaaatttgttgaa
atacaatttgataagcaaggaagaatatctggagctgctgtaaggacctatcttctagag
aggtctcgtgtgtgtcaaatctctgatccggagcgcaattaccactgcttctatcttctc
tgtgccgcaccgcaggaggagattgagaagtacaagcttggccatccaaagacctttcat
tatctgaaccaatccaaatgctacgagcttgtcggtataagcgatgctcatgattatctt
gcgacaaggagagctatggatattgtcggaattagcgaaaaggaacaggaagcaattttc
agggtggttgctgcaattcttcacatttgaaacatcgattttactaagggaaaggaagtg
gactcatcagtaccaaaggatgataagtcgaagtttcatcttaagacagcagcggaactt
ctcatgtgtgatttaaaagctcttgaagatgcattatgtaaacgtgttatggtcactcct
gaggaagttattaagagaagtcttgatccacagagtgctgtcactggccgtgacggtttc
gctaagacagtctattctcggttgtttgattggttggtagacaagattaataagtcgatt
ggacaagatgccaattctagatctctaattggagttctggacatttacggatttgagagc
ttcaaaactaacagttttgaacagttctgtattaatttcactaatgagaagttgcagcaa
catttcaatcagcatgttttcaagatggaacaggaagaatacacaaaagaagcaatagat
tggagctacattgagtttgtggacaatcaagatgttcttgatcttatagaaaagaagcct
ggtggcattgttgctctcctcgataaagcttgtatgtttccaaaatcaacacacgaaaca
tttgcaaacaagctatatcagacttttaaggctcacaagaggttcatcaaaccaaaactc
tctcgaaccgattttaccgttgcccattatgctggagaagttctctatcagtctgatcta
tttcttgataaaaacaaggactatgtgatccctgaacaccaagatttgttgggagcttcc
aaatgtccttttgtggtcggtcttttccctccactccctgaagaaacgtccaagtcttca
aagttttcatccattggttctcgtttcaagctgcaacttcaacaacttatggaaacacta
aattctacggagcctcattacatcagatgtgtgaagcctaacaatctcttaaagcctgcc
atatttgagaatgtgaacatcatgcagcagctccgatgtggtggtgttttggaagcgatt
agaattagttgcgcagggtatccaactcgtaaacctttctttgagttcataaatcgtttt
ggacttctatatcctgaggctttagaagggagctacgatgagaaagtcgcatgtaaaaag
atcttggacagcatgggactaaaaggataccagattggtaaaacaaaggttttcttgagg
gctggtcagatggctgagctcgacgctaggagaacagaggtgcttagtggtgctgcgaaa
aaaatacagagacgaacacgaactcatcaggctcagaaacggtttattgttctgagaaag
gccacgatatcgctccaagctctatgtagagcaagactttcctgcaaactatttgaaaat
ctgagacgagaagctgctgctgtgaagattcagaagaatggtcggagatattactctaga
aaatcgtacaaaaagctccatgtgtctgctctttccgtacagactggtttaagagcaatg
gctgctcgtaagcaattcagattcaggaagcaaacaaaggctgccactattgttcaggct
cagtggcgttgtcacagagcaacaacgtactacaagaagcttaaaaatggagtaatcata
tctcagacaagatggagaggaagacttgctaagagagaacttaagaagctcaaaatggct
tcaagggaaacaggagcatttaaagaggcaaaggatatgcttgagaagaaagttgaggaa
ctcacataccgtgcccagttggagaaacgtctgaggggtgatttagaagaagcaaagact
caggagataacaaaacttcagagttcgttggaggaaatgaagaagaaagtggatgaaaca
aacgcattgcttgtgaaggaacgcgaagctgcaaagaaagccgctgaagaagctcctcct
gttatacaagaaacacaagttttagttgaagatactaagaagattgagttgatgactgag
gaactggagagtgtaaaggctactctagaaaacgagaaacagagggctgatgatgcagtg
agaaagtttgaagaagctcaagagtccctcgatgaaaaaaagaagaaactggaagagaca
gagaagaaaggtcagcaactccaagaatctctgacaaggatggaggaaaagtgcaccaac
ttggaatcggagaataaagtcttaaggcaacaggctgtctccatggctccgaataagttc
ctctctggacgctcaaggtccattttacagagaggttcagagagtggtcatctagcagtg
gatacaaggtcaagcttggatcttcacagcaactcaatgaaccacagggatccatcagaa
gttaatgataaaccacaaaaaacattaaacgagaagcagcaagagaatcacgagctgctt
atccgctgcatcgttcaacctttgggtttcaaagggaaccgacctatcacagcatgtatc
atatacaaatgcctactgcaatggaggtcgtttgaagttgaacggaccagtgtctttgat
cgcattatccaggctataggccatgctattgagagtcaagataacaacaatacattggct
tattggttatcaaatgcctcgacactcctcttacttctccaacgcacgcttaaagctagt
ggtgcagctgggatggctccacagcgtcgccgttcgtcttctgccagtctatttggaagg
atgactcagagcttccgcggaacaccacaaggtgtgaattttgcaatgataaacggtggt
gcgggaggtggagcggatacgttaagacaagttgaagcaaagtacccggctctgctgttt
aagcagcagctcacagcttatgttgaaaagatatacggaatgattcgggacaacttgaag
aaggagatttctccactccttggattgtgcattcaggcgccaagaacatctagggcaagt
ttagtgaaaggagcatctcgttccgtagccaacacgccagctcatgaagctctgatcgct
cactggcaaggaattgtgaagagccttacaaacttcctcgatactttgaaatcaaacaat
gttccttcgttcttggtgtgtaaggtgtttacacagatattctcattcgtcaatgttcaa
ctgtttaacagtcttctgttgagacgtgagtgttgttcatttagcaatggcgagtatgtc
agagctggcttgtgtgaattggaaaactggtgttttaaggcaacagatgagtatgcgggt
acttcgtgggaagagttaaagcatataagacaagccattgggtttctggtaatacaccaa
aaaccaaagaaaactctcgatgagatcagtcatgatctttgcccgaagactcgaacaatg
ctgttagcaactctttccttttggatgacgactcaagcattccattctcggttgatgatt
tatcaaagtcgatggagagatttgacattgctgatatcgaaccgccacctttaa
DBGET
integrated database retrieval system
