Brassica oleracea (wild cabbage): 106295293
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Entry
106295293 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis protein 6-like
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106295293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106295293
Membrane trafficking [BR:
boe04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106295293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
AAA_lid_3
NPHP3_N
AAA_22
nSTAND3
RNA_helicase
Rad17
AAA_28
AAA_17
AAA_33
AAA_7
AAA_18
TIP49
TsaE
DUF815
Parvo_NS1
ATPase
Mg_chelatase
AAA_14
IstB_IS21
nSTAND_NTPase5
AAA_25
AAA_2
PhoH
Vps4_C
AAA_24
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
106295293
NCBI-ProteinID:
XP_013586608
LinkDB
All DBs
Position
C5:complement(833155..837643)
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AA seq
911 aa
AA seq
DB search
MVERRSPLVLSSTRATLRSVLNSLQPVASGGARASNSDGIRLPAGILRWQRDGVNDSDSK
FDSFDDSALVGLSTXKRLSINAGSLVVINNIDIGIQRIAQVVVLDPPPKTTTLDDASLVL
DSLHTMLVFPTYDLMMMTQQLLAQEVAYVSPMLAFNLGLHVSCLKSLVHRGNEVLEKYFV
AKFDEGESAVGGSKIGLELEPVSEAPGYASHLRVSFVKIPECGTTVLHKYFGTDRQMSRG
GVFRVYIDWNCGSSICIPCSGRLCSKSEDYIYFKVIAMEPSNERFLRVNHYQTALVLGGT
VSSGLPPDLLVSRSKVPMPLQEDAVNVLASVLSPPLCPSALSLKLRFAVLLHGLPGCGKR
IVVNYVARRLGLHVVEYSCHSLLSSSERKTSTALAQTFNMARRFRPTILLLRHFDVFKNL
GSQDGSQGDRVGVASEIASVIRELTEPVSNGEYSSMEEESNDNSSVDEVGKFRGHQVLLI
ASTESTEGLSPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQLLNTSSDEFVKELVGQ
TSGFLPRDLLALVADAGANLFNSKESETEKMNSLSGDPVGDDVDQSSQLDKSNETLTPKA
DFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRK
RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSAR
PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGANNRPDLID
PALLRPGRFDKLLYVGVNADATYIERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMY
ALCADAWFQAAKRKVLNSDSEEXSLPEDDPDSVVVEYVDFIKAMDQLSPSLSISELKKYE
ALRDQFEGRSS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggagagacggagtcctctcgttctctcatccaccagagccacactccgctcagtg
ctcaattctcttcaacccgtcgcttccggcggcgcccgagcttcgaatagcgacgggatt
aggttgccagctggcattctcaggtggcaacgggacggagtaaatgattccgattcaaag
tttgattctttcgatgactcagcattggttggactctcgactnncaagagactttccatc
aacgccggctctttggttgttatcaacaacatcgacataggcatccaacggatcgcgcaa
gtcgttgtacttgatcctcctcccaagacgacgacgttggatgatgcctctctcgttttg
gactctctccatacaatgcttgtctttcctacttacgatttgatgatgatgactcagcag
ttactagctcaagaggttgcttacgtgtctccgatgttagcttttaatctcggcttgcac
gtgtcttgcctgaagtccctcgtccatcgagggaacgaggtcttggagaagtattttgtt
gctaaattcgacgaaggggaatctgcggtgggtggctctaagattggtttggagttggaa
cctgtgtctgaagctccggggtatgcatcgcatctgagggtttcgtttgttaagatcccg
gagtgtggtaccactgtgttgcataagtattttggaactgataggcagatgtcaagaggg
ggtgtgtttcgcgtttacattgactggaactgtggttcaagcatttgtattccatgtagt
ggaaggttatgctccaaaagcgaggactatatatatttcaaggttattgcgatggaacca
tctaatgagaggtttcttcgagtcaatcactaccaaaccgctcttgtacttggaggaacg
gtctcttctggtcttccaccggatttgctggtttctagatcaaaggtccctatgcctttg
caggaggacgcagtaaatgttttggcgtcggtgctttctccacctctctgcccatcagca
ctctccttaaagctcaggtttgctgttttactacatggcctgcctgggtgcgggaagcga
attgttgttaactatgttgctaggaggttgggcctgcatgtagttgaatatagctgccac
agtttattatcatcatctgaaaggaagacgtctactgctctggcacagacttttaatatg
gcacgaaggtttagaccaacgatacttctgctccgccatttcgatgtttttaaaaatctg
ggatctcaggatggctcccagggggatcgagttggcgtagcctcggagattgcatcggtt
attagggaactcactgagccagtttctaatggtgaatacagttccatggaagaagaatcg
aatgacaattcctctgtagatgaagttgggaagtttaggggacaccaggtgttgttaatt
gcatctactgaaagcactgaaggtctctctccgacaatcaggcgttgctttagccatgag
atacggatgggttctctaaatgacgaacagagatctgagatgctgtctcagtcactccaa
ggtgtttctcagctccttaataccagctcagatgaatttgtgaaagaattagttgggcag
acttctggtttcctacctcgggacttgcttgctcttgtagctgatgctggtgccaactta
ttcaacagtaaagagtccgagactgaaaagatgaattctctgtcgggtgatcctgttgga
gatgatgtagaccagtcaagtcaattagataagagcaatgagacattaacacctaaggca
gacttcacaaaagctttggatcgatcaaagaaaagaaatgcatcagcccttggtgctcct
aaggttccaaatgtgaaatgggatgatgttggtgggcttgaggatgtgaagacttcgata
ttggacacagttcagttacctctcctgcataaagatttattctcatctggactacgtaaa
cgttctggtgtacttctctatggccctccaggaacagggaaaactttacttgcaaaagct
gtggcgacagagtgctctttaaatttcctgagcgtaaaaggtccagagttaatcaacatg
tatattggcgagtcagagaaaaatgttcgagatatattcgaaaaggcgagatcagcacgg
ccgtgtgtgatcttctttgatgagcttgattcacttgctccagctcgaggtgcttctggt
gattcagggggagtcatggaccgagtggtctctcagatgcttgcagagattgatggactc
agcgattcttcccaggatctgtttattataggagcaaacaacagacctgacctgattgat
ccagctcttctacgacctggcagattcgacaaacttctttatgtcggagtcaacgctgat
gcgacttacatagaaagggtcctaaaagcactgacgcggaagtttaagctaagtgaagat
gtatcgctttattcagtagcaaagaagtgtccctcgacgttcactggcgctgatatgtac
gcattgtgtgcggatgcttggtttcaggcagctaagcgaaaggtcttgaactcagattca
gaggagntgtctcttccagaagacgatccagattctgttgttgtagagtatgtggatttt
ataaaggcgatggatcagctttcgccatcactctccataagtgaactgaagaagtatgag
gcgcttcgagaccaatttgaaggccgttccagctaa
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