Brassica oleracea (wild cabbage): 106295312
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Entry
106295312 CDS
T04124
Name
(RefSeq) auxin response factor 19 isoform X1
KO
K14486
auxin response factor
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106295312
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
ORF29
RA
DUF4839
Motif
Other DBs
NCBI-GeneID:
106295312
NCBI-ProteinID:
XP_013586633
UniProt:
A0A0D3CBG4
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Position
C5:complement(9419327..9424095)
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AA seq
1052 aa
AA seq
DB search
MKAPSNGFHPNPTEGEKKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ
TDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKINR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVIS
SDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMF
ETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP
FYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGLSLVQWM
SMQQNNPLSAGAAAATTHLPSSYNLPNNFSPNDHSKLLNFQSPNLSPAITQFNKPNMVSH
ISQQMQAQPAMVQSQQQQQQQLQQQVQMSHQQLQQQHHQHQQQGGYNSGSVNNGVSVVSN
QVSCQNQSAGFTQSQQQSMLSNGAKMTHQNMVSAGNKGSSQMTAQELQFQQQLELHNSTQ
LLRNQQEQSSMHSLQQNPQQLQMQQQQSSKPSPSQQFQLQLLQKLQQQQQSTPPPVSSSL
QPQLSSLQQTQSHQLQQLLSSQNQQPLPQSNNNSFMQPPQIQASHHQQQGYMNNNKPIVR
SQSGHIDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQGQGVSVPASDPVQQGMVNLKS
AGEQFKFKAAVTDQIDVTTAGTTYCPDVVVGPGQQQQQTFPLPSFGFDGDLQQSQHPRNS
LAFAGNIEAVNPDALYSQKDFQNLVVPNYGNAPRDIETELSSASQSFGIPSIPFKSGGSN
EIGGINDSGIMNGGIWPNQAQRMRTYTKVQKRGSVGRSIDVTRYSGYEELRNDLARMFGI
EGQLEDPQISDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSAEVQQMSLDGDLAA
IPTTNQACSETDSGNAWKVHYEDTSAAASFNR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctccatcaaatggatttcatcccaatccaacagaaggagagaagaaagcaatc
aattctcagctatggcacgcttgtgctggtcctcttgtttcattgcctcctgtcggaagt
cttgttgtttacttccctcaaggacatagcgagcaagttgcagcatcgatgcagaagcaa
accgattttatcccaaactacccaaatcttccttctaagctcatttgcttgcttcatagt
gttactttacatgctgatacagagaccgatgaagtctatgcccaaatgactcttcaacct
gtgaataagtacgatagagaagcactcctagcttctgatatgggtctgaagataaacaga
caacccactgagtttttctgcaagactcttacagcgagtgacaccagcactcacggtgga
ttctctgtaccacgtcgtgctgctgagaaaatattccctcctcttgatttctcaatgcaa
ccccctgcacaagagatcgtagctaaagatttacacgacactacatggacctttagacat
atctatcgaggccaaccgaaaagacatttgcttaccactggttggagcgtttttgttagt
acaaagagactattcgctggggactcagttttgtttgtaagagatgagaaatcacagctg
acgttgggtataagacgtgcaaacagacaaacgccgactctttcctcatcggtcatatcc
agcgacagtatgcacattgggattctcgcagctgcagctcatgccaatgccaacagcagc
cctttcaccatcttcttcaacccaagagcgagtccttctgagtttgtagttcctctagcc
aagtacaacaaagcgttgtacgctcaagtgtctcttggaatgcggttccggatgatgttt
gagacagaggattgtggggttcgaagatatatgggtacagtcaccggtattagtgatctt
gaccctgtcagatggaaaggctcccaatggcgtaaccttcaggtgggatgggatgaatca
acagctggagataggccaagccgagtctccatatgggagattgaaccagttataactccg
ttttacatatgccctcctccgtttttcagacctaagtacccgagacagccagggatgcca
gatgatgagttggacatggagaacgctttcaaaagagcaatgccttggatgggagaagag
tttgggatgaaagacgcgcagagttcgatgtttcctggtttaagcctggttcagtggatg
agtatgcagcagaacaacccattgtccgctggtgctgctgctgctactactcatctaccg
tcgtcttataacctacctaacaatttttctcccaacgaccattcaaagctgttgaacttc
caatccccaaacctctctccggcgattactcagttcaacaaaccgaacatggttagccat
atcagtcaacagatgcaagcacaaccagccatggtgcaatctcaacaacaacaacaacaa
cagctgcagcaacaagtacagatgtcacatcaacagctgcagcagcaacatcatcagcat
cagcagcaagggggttataactcaggttctgtaaacaatggcgtgagtgttgtttctaac
caagtctcttgtcagaatcagtctgctggttttactcagtctcagcagcagtcaatgctc
tctaatggcgctaaaatgacccaccagaacatggtttccgctgggaataagggctcgtct
caaatgacagcgcaagaattgcagtttcagcagcagttggaattgcacaacagtacccag
ttgttgagaaaccagcaggaacagtcgtctatgcattcactacaacaaaatcctcagcaa
ctccagatgcaacaacaacaatcatcaaaaccaagcccctcacaacagtttcagctgcag
ctactgcagaaactacagcaacagcagcagtcaactcctcctccggtaagctcttcctta
cagccacagttatcgtcgctgcaacagacacaaagccatcaactgcaacagcttctgtcg
tctcagaatcaacagcccttgccacagagtaataataacagcttcatgcagcctccacag
attcaggcgagtcatcatcagcaacaaggatatatgaataataataagcctattgtaaga
tcgcagtctggtcacatagatggagaagctccttcttgttcaacctccccatccgccaat
aacacaggacatgataacgtttcaccgacgaatttcctgagcagaaatcaacaacaagga
caaggagtatctgtacctgcatctgatccagtccaacaaggcatggtgaatctgaagagc
gctggtgaacagttcaagttcaaagccgcagtaacagatcaaatcgatgtaaccacagcg
ggaacaacttattgtcctgatgtcgttgttggccctggacagcagcagcaacagactttc
ccattaccatcattcggttttgatggagacctccaacaatctcagcatccaagaaacagc
ttagctttcgctggtaatatcgaagctgtgaatcctgatgctctctattctcaaaaggac
tttcagaacttagtagtacccaactatggcaatgcgccaagagacatcgagacagagctg
tccagtgcttctcagtcatttggtattcccagcattccctttaagtccggaggttcaaat
gagataggtggcatcaatgattcagggattatgaacggtggaatctggcccaatcaggct
caacgaatgcgaacatatacaaaggttcaaaaacgagggtcagtgggaagatcaatagat
gttacccgttatagcggctacgaggagctcaggaatgacttggcgagaatgtttggcatc
gaaggacagcttgaggatccacaaatctctgactggaagcttgtatacacagatcatgaa
aacgatatactgctcgttggtgatgatccttgggaggaatttgtgaactgcgtgcaaaac
ataaagatactgtcatcagcagaagtgcagcaaatgagcttagacggagaccttgcagct
atcccaaccacaaaccaagcttgtagtgaaacagacagcggaaatgcttggaaagtacac
tacgaagacacatctgctgcagcttcattcaacagatag
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