Brassica oleracea (wild cabbage): 106295315
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Entry
106295315 CDS
T04124
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106295315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106295315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106295315
Membrane trafficking [BR:
boe04131
]
SNARE
Syntaxin (Qa)
Stx-PM
106295315
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106295315
Exosomal proteins of other body fluids (saliva and urine)
106295315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Synaptobrevin
Seryl_tRNA_N
Piezo_THU9_anchor
DUF5089
Syntaxin_2
Syntaxin-18_N
Prominin
SesA
DUF6584
OppC_N
Motif
Other DBs
NCBI-GeneID:
106295315
NCBI-ProteinID:
XP_013586636
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Position
C5:complement(3254893..3256290)
Genome browser
AA seq
307 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKSAMKDLESGPPDSDLEMANNNNTDSNLSSFLEEAEKVRSEISL
ITETLSRISQYNDESKSAHKADSVKSLRNKISNEIVSGLRKAKSIKATLEEMDRANREIK
RLSGTPVFRSRVAVTNGLRKKLKEVMMEFQGLRQRMMSEYKETVERRYFTVTGERPDEEM
IEKIVSDGGEEFLARAVQEHGRGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMV
EAQGEQMDEIEHHVMNASHYVKDGAKELNTAKKHQRSSRKWMCIGIIVLLLIILVVIIPI
ITSFTSS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctaatgaccaaatcgttcacaagctacgtcgacctaaaaaaatcagcgatg
aaggatctagaatccggaccaccagactccgacctcgagatggcgaacaacaacaacaca
gactcaaatctctcctcgttcctagaagaagccgagaaagtgagatcagagatctctctg
atcaccgaaacgctctctcgcatctcgcagtacaacgacgagagcaaatccgcgcacaag
gcggactccgtgaagtctctccgcaacaagatctccaacgagatcgtctccggtttacga
aaagcgaaatcgatcaaggccacgctggaggagatggatcgagcgaaccgagagatcaaa
cggttatcgggaactccggttttcagaagcagagtggcggttactaacggtttgaggaag
aagctgaaagaagtgatgatggagtttcaggggctgaggcagaggatgatgagcgagtac
aaggagaccgttgagagacggtactttacggttactggcgagagaccagacgaagagatg
atcgagaagattgttagcgacggaggtgaagagtttctcgcacgtgcggttcaggagcac
gggagaggaaaggtcttggagactgtggttgagattcaagacaggtatgatgcggcgaag
gagatagagaagagtttgttagagctacaccaagtgtttctagatatggctgtgatggtc
gaagcgcaaggcgagcagatggatgagatcgagcatcacgtgatgaacgcgagccattac
gttaaagatggtgctaaggagttgaataccgcaaagaagcatcagagaagcagtaggaaa
tggatgtgcattggtatcattgtgctgctcttgatcattcttgttgttatcatccccatc
attaccagtttcacctcatcttga
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