Brassica oleracea (wild cabbage): 106295399
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Entry
106295399 CDS
T04124
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106295399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106295399
Membrane trafficking [BR:
boe04131
]
Endosome - Golgi transport
Others
AP-1 complex
106295399
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
PDS5
Pro-rich_19
Motif
Other DBs
NCBI-GeneID:
106295399
NCBI-ProteinID:
XP_013586740
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All DBs
Position
C5:13232162..13237939
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AA seq
900 aa
AA seq
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MNSIFSGTRLRDMIRSIRACKTAAEERGVVRKECADIRASINENDPHDRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY
VVGLALCALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRIVRKVPDLAENFIN
AASSLLKEKHHGVLITGVQLCYELCTINDEALEYFRKKCTEGLIKTLRDITNSAYQPEYD
VAGITDPFLHIRLLKLLRVLGHGDADASDLMTDILAQVATKTESNKNAGNAVLYECVETI
MAIEDTSSLRVLAINILGRFLSNRDNNIRYVALNMLMKAIAFDDQAVQRHRVTILECVKD
PDASIRKRALELVSLLVNENNVKQLTKELIDYLEISDEDFKEDLSAKICSIVEKFSPEKI
WYIDQMLKVLSEAGKFVKDDVWHALIVVISNASELHGYTVRALYKAVLTYSEQETLVRVA
IWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVVEDAITRHNSDMTTKAMALVALLKLS
SRFPSISERIKDIIVKQKGSLLLEMQQRAIEFNSIVDRHKNIRPSLVERMPVLDEATFNV
RRAGSLPASVSTMAKPSVSIPNGVAAAPLVDLLDLGSDDIMAAPSSSGADFLQDLLGVDL
GSSSAQSGATPGPKAGADLLMDILSIGTPSPAQNNTSSVDLLSTPGINKNPSNALDTLSS
PALPHIATTASAGGMFDLLDGLTPSPSKEATNGPAYPPIVAYESSTLKIEFTFSKSSGNP
QETNVQATFINLSPNTFTDFIFQAAVPKVISVFFFSPLLSSYQNFFNIVFRSFNLQFLQL
HLDPASSNTLPASGNITQNLRVTNSQHGKKSLVMRMRIGYKVNGKDVLEEGQINNFPRGL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaattttttccggtactcgtctaagggacatgattcgatccataagagcgtgc
aaaacagctgcggaggagcgtggcgttgtgaggaaagagtgtgctgatatcagagcatcc
attaatgaaaatgaccctcatgataggcaccggaacctcgccaagctcatgttcatacac
atgctgggttacccgacgcattttggtcagatggagtgcttgaagcttattgcgtctcct
ggcttcccagagaagaggattggttatctcgggctgatgttgcttcttgatgagagacag
gaagtgttgatgctcgtcacaaattcattaaaacaagatcttaaccacacgaaccagtac
gttgtagggctcgcgctctgtgctttagggaatatttgctctgcagaaatggctcgtgat
cttgcgccagaagtagaaagattgatccagtttcgtgaccctaatatccgtaagaaggcg
gcactttgctccactagaatagtaaggaaggttccagatcttgcagagaactttataaat
gctgcttcttccttgcttaaagaaaagcatcatggggttcttataacaggagttcaactt
tgttatgaactctgcacgatcaatgatgaggccctagaatacttccgaaagaaatgcacg
gaggggctgataaaaactttgagggatattactaatagcgcatatcagcctgagtatgat
gttgcagggatcacagatccttttcttcacatacggttacttaagctcctgcgtgtttta
ggccatggtgacgctgatgctagtgatttgatgactgatatacttgcccaggtggccaca
aaaactgaatcaaacaaaaacgcaggaaatgccgtactctatgagtgtgttgaaacaatc
atggccattgaagacaccagtagcttgcgtgtgcttgctatcaatatcttgggaagattc
ttatctaaccgcgacaacaatatcagatatgttgcattaaacatgctgatgaaagcaatc
gcgtttgatgatcaagcagtgcaaaggcacagagttacaatcttagaatgtgttaaggac
ccagatgcttccatccggaaaagagctcttgagctcgtctctcttttggtaaatgagaac
aatgtcaaacaactgacaaaggagctgattgattatttggaaatcagcgatgaagatttt
aaggaggatcttagtgcgaaaatctgttccatcgttgaaaagttttctccagagaaaatc
tggtacattgatcagatgctcaaggttctgtcggaggctggaaagtttgtgaaagatgat
gtgtggcatgcactgattgttgtcataagtaatgcatcagagcttcatggatatacagtc
agagcattatacaaagcagtcctgacatattcggaacaggagacccttgtccgagtggcg
atttggtgcattggggaatatggtgatttgctggttaacaatgtggggatgcttggtatt
gaagatccaataacggtaacggaaagtgatgcagttgacgttgtcgaggatgccattact
cgccataactcagatatgactaccaaagctatggcattggttgctctgctgaagctgtca
tcccgctttccttctatctcagagaggattaaagatataattgtgaagcagaaagggagc
cttctccttgaaatgcagcagagagctattgaattcaattctattgttgacaggcataaa
aatatcaggccttctctagttgagagaatgccggtgctagatgaggctaccttcaatgtg
aggagggctggctctttacctgcgtcagtttcaacaatggccaaaccttcagttagtatt
ccaaatggtgttgctgcagctccactagtggatttactggacctgggttctgacgatatc
atggctgcacctagttcatctggtgcagatttccttcaggatcttctgggtgttgactta
ggatcatcgtcagcacaatctggtgcaaccccgggtccaaaagccggtgcagatctgttg
atggatattttatcaattgggacaccttccccggcacaaaacaacacatcatcagttgat
ttgttatcaacacctggcattaacaagaatccttctaatgcgctagacacactttcttca
ccagctctacctcacatagcaacgactgcttctgctggtggtatgttcgatttgttagat
ggtcttactcctagcccatcgaaggaagcaaccaatggtccagcatatccacctattgtt
gcatacgagagcagcaccttgaagattgagttcacattctcaaagtcatcagggaaccca
caagaaacaaatgtccaggccacttttataaatctatctcctaatactttcacagatttt
atcttccaggctgctgttccaaaggtcatttcagttttctttttttctcccttattatcc
agttatcaaaatttctttaacattgtctttcgttcatttaatctccagttcctccagctg
cacttggatccagcaagcagtaacacactcccggcaagcggtaacatcacgcagaatctg
agagtcacaaacagccagcacggcaagaaatctcttgtgatgcgcatgaggattgggtac
aaagtgaacggaaaagatgtattggaggaaggacagatcaacaacttccctcgtgggttg
tga
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