Brassica oleracea (wild cabbage): 106295443
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Entry
106295443 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106295443
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106295443
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106295443
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106295443
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106295443
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106295443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
UCH_1
MATH
RA_2
RA
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
106295443
NCBI-ProteinID:
XP_013586795
UniProt:
A0A0D3CL18
LinkDB
All DBs
Position
C5:41973743..41983195
Genome browser
AA seq
1118 aa
AA seq
DB search
MVTPTPLDQQEDEEMLVPHSDVVEGPQPMEVAQPEAAAAAAAAAVENPPVEEPPTMKYTW
TIPGFTRLNTRKHYSDVFVVGGYKWRVLIFPKGNNVDNLSMYLDVADAANLPYGWSRFSQ
FGLAIVNQINSSYSIRKESQHQFNSRESDWGFTSFMPLSELYDPTRGYLVNDTVVIEAEV
AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT
ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYESFDKYVEVERL
EGDNKYHAEGHDLQDAKKGVLFIEFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL
DRDNRKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
DVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRVRLKKEQEEKEDKKKYKAQAHLFTTIKVARDEDITEQIGKNKYFDLVDHEKVKSFR
IQKQTPFQLFKEEVAKEFGVPVELQRFWIWAKRQNYTYRPNRPLLPHEELQTVELLREAC
NKTNNAELKLFLEIERGPEERPIPPPDKSSADILLFFKLYDPENAILRYVGRLMVKKSSK
PMDIVGQLNQMAGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLSQIEDGDIICFQKPL
SIQENECPYPDVPSFLAYVQNREVVRFRSLEKPKEDEFTMELSKLHTYDDVVQRLAEKLG
LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFFHKIY
KIFSSTERIENINDQYWTLRAEEIPEEEKNIGPSDRLVHVYHFTKEAGQNQAQVQNFGEP
FFLVIHEGETLEEIKSRIQKKLHVPDEDFAKWKFASFSMGRPDYLQDTEVVYDRFQRKDV
YGAWEQYLGLEHVDNAPKRAYAANQNRHAYEKPVRIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggtgactccaacgccgcttgatcagcaagaggacgaggaaatgctcgttccgcattct
gatgtggtcgagggacctcagcccatggaagttgctcaacctgaggctgctgctgctgct
gctgctgccgctgtggagaatcctccagtggaggagcctcccactatgaagtacacgtgg
actataccaggtttcactaggctgaacaccaggaagcattactctgatgtatttgttgtt
ggagggtataaatggagagtattgatttttcccaaaggaaacaatgttgacaatttgtcc
atgtacttggatgttgctgacgctgcgaatttgccctacgggtggagcagattttcgcag
ttcggcctggctatagttaatcaaatcaacagcagctattccatcagaaaagagagtcag
catcaattcaattcaagagaaagcgactgggggtttacatcattcatgcctctcagcgag
ctttatgatcccactcgtggatatttagtgaatgatactgttgtaattgaagctgaagtt
gctgtgcggaaggtccttgattactggtcatatgactcaaaaaaagagactggttttgtt
ggactaaagaaccaaggtgctacctgttacatgaattctctcctgcaaacgttataccac
ataccttatttcagaaaggctgtttaccacatgccaacaactgagaatgatgcacctacg
gcgagtatcccattggcgctccagagtttgttttacaagcttcaatataatgacaccagt
gtagcgacaaaggagctgaccaagtcgtttggttgggatacatatgattcgttcatgcaa
catgatgttcaagaactcaaccgagttctctgtgaaaagcttgaggacaaaatgaaggga
actgttgtggagggaacaatacagaagttattcgagggtcaccacatgaattacatagag
tgcatcaatgtagattacaaatctacacggaaagaatcattctatgacctccagcttgat
gttaaaggctgcaaagatgtatatgaatcttttgacaagtatgttgaagttgaacgcctt
gaaggtgacaacaaataccatgcagaaggacatgatttacaggatgcaaaaaagggtgtt
ctgtttatagaatttccacccgtacttcaacttcagctcaagaggtttgaatatgatttt
atgcgagacacaatggtgaagataaatgatcgatatgagtttcctcttgaactggatctt
gacagagataatagaaagtatttatcccctgatgctgacaagagtgtccgtaatctatac
acactccacagtgtcttagttcatagtggtggagtgcatggaggccactattatgctttt
attaggccaactctctcagaccagtggtataaatttgatgatgaacgggtgacgaaggaa
gatgtgaaaagagcgctggaagagcaatatggtggtgaagaagagttgccgcagaataat
cccggtttcaataacccaccttttaaattcacaaaatactcgaacgcgtacatgcttgtt
tatattcgggaaagcgacaaggataaaataatctgcaacgttgatgaaaaagacattgca
gaacatttacgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaaaaaaatac
aaggctcaagctcaccttttcacgacaatcaaggtcgcaagagatgaagacattactgag
caaattggaaagaataaatactttgatcttgttgatcatgaaaaagttaagagtttccga
attcagaaacagaccccctttcaactatttaaggaagaggtggccaaagaatttggtgtc
ccggttgagctacagcggttctggatttgggcaaagcggcagaactatacttatcggccc
aaccgccccctattacctcatgaagaattacagacggttgaacttttaagagaggcatgt
aacaagacaaacaatgctgaactaaagctgtttctggaaatagagcgcggaccggaggag
cgtcctattcctcccccagacaagtcatctgcagatattctccttttctttaagctctat
gaccctgagaatgcaattctaagatatgttggtaggctcatggtgaaaaaatccagtaag
cccatggacatagtagggcaattgaatcaaatggctggctttgctcctgatgaggaaata
gaactttttgaggaaataaagtttgaaccttgtgtcatgtgcgaacatctggataagaag
acttctttcagactatctcaaattgaagatggagatatcatatgctttcagaaacctctt
tctatccaggagaatgaatgtccttacccggatgtaccatcgtttttggcgtatgtacag
aatcgagaggtggtgcgctttcgaagtctcgaaaaaccaaaagaagacgagttcactatg
gagttgtcaaagctgcacacgtatgatgatgttgtccaaagattagctgagaagcttggc
cttgatgatccatcgaaaattaggcttacttctcacaattgctactcccagcaacccaag
ccccagcctattaaataccgtggagtagaccatctttcagatatgttagctcactataat
cagacgtctgacattttgtattatgaagttctggacattcctcttccagaattgcaaggt
cttaagactctgaaagtagctttccatcatgccacaaaggacgaggtggtaatccacaat
atcagacttcctaaacagagtactgtaggagatgttatcaacgaacttaaaacaaaggtg
gagttgtcgcatcctgatgcagaactgaggttgctggaggtgtttttccacaagatctac
aagatcttttcatctacggaaagaattgagaatatcaatgaccagtactggactttacga
gcagaggagatacctgaggaagagaagaatattggtcccagtgatcgattagtccatgtg
taccattttactaaagaggccggacaaaatcaagcgcaagtacaaaatttcggcgagccg
ttctttctggtaatccacgaaggtgaaactttagaagaaatcaagtcccgtatccaaaag
aagctccatgtacctgatgaggacttcgccaagtggaagtttgcttctttctcaatggga
cgtcccgactacttgcaggacacagaggtcgtttatgatcgctttcagagaaaggatgta
tatggtgcctgggagcagtatcttgggttggagcacgttgataatgctcctaaaagggct
tatgctgcaaatcagaaccgacacgcatatgagaagccggtgagaatatacaattag
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integrated database retrieval system
