Brassica oleracea (wild cabbage): 106295473
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Entry
106295473 CDS
T04124
Name
(RefSeq) 66 kDa stress protein isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
boe04990
]
106295473
Domain-containing proteins not elsewhere classified [BR:
boe04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
106295473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
CFAP251_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Tricorn_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
PD40
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
106295473
NCBI-ProteinID:
XP_013586840
LinkDB
All DBs
Position
C5:complement(36808589..36815642)
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AA seq
609 aa
AA seq
DB search
MTLAETYACIPSTERGRGILISGDSKSDTMLYTNARSVVILDLNNPLKVSIYGEHAYPAT
VARYSPNGEWIASGDVSGTVRIWGARDDHVLKKEFKVLAGRIDDLQWSADGMRIVASGDG
KGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKFK
LSSREHSNFVNCVRYSPDGSKFITVSSDKKGVIYDGKTCEKLGELSSEDVHKGSIYAVSW
SPDGKEVLTVSADKSAKVWEISDSGNGTLKTTLTCPGSSGGVDDMLVGCLWQNDHIVTVS
LGGTISIFSASDLDKSPFQFSGHMKNISSLSVLRGSSDYILSGSYDGLICKWMMGRGFCG
KLQRKQNSQIKCFAAHEEEIITSGFDNTISRISYQDGQCTNEESIGVGNQPNDLSLAPLS
PGLLLVAFESGVVFLRGEKVVSTINLGFTVTALAVTPDGTEAIVGGQDGKLRLYAVNGDS
LTEEAVLEKHRGAISVIRYSPDLSMFASADLNREAVVWDRASREMKLKNMLYHSARINCL
AWSPNSSMVATGSLDTCVIVYEVDKPASTRMTIKGAHLGGVYGLGFADDTHVVSSGEDAC
IRVWSLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgccgaaacctacgcctgcatcccttcgacggagaggggtcgcggaatcctg
atctccggcgactccaagtccgacaccatgctctacaccaacgcccgatccgtcgtgatc
ctcgacctcaacaaccccttgaaggtctctatctacggagagcacgcttacccagctacg
gtggcgcggtactcccccaacggagagtggatcgcgtcgggcgatgtctccgggacggtg
aggatctggggagctcgcgacgatcatgtgcttaagaaggagtttaaggtgttggctggg
aggatcgatgatctccagtggtcggctgatgggatgcggatcgttgcttctggtgatggc
aaaggaaagtctctagttcgtgctttcatgtgggattcaggatcgaatgtgggagagttt
gatggacattcaaggcgtgttcttagctgtgctttcaagcctaccagacccttccgcatt
gtaacttgtggagaggattttctggttaatttctacgaaggtcctcctttcaagttcaag
ctctcaagcagagaacattccaactttgtcaactgtgtgaggtattcaccagatggaagc
aagttcattactgtaagttcagacaaaaagggagtcatatatgatggaaagacttgtgag
aaactgggagaactctcatctgaagatgtgcataaaggtagcatctacgctgttagctgg
agtcctgatggcaaagaggtcctcactgtatctgcggacaagtcagctaaagtatgggaa
atctcggattctggtaacggaacattgaagaccacgttgacttgtccaggatcatcaggt
ggagtggacgatatgcttgtcgggtgtctgtggcagaacgatcatatcgtcactgtttct
cttggtggtacaatcagcatattctcagcaagcgatcttgataaatcccccttccagttt
tcgggacacatgaagaacatctcttccttatctgtgctcagaggaagttctgactacata
ctatccggtagctacgatggtctgatatgtaaatggatgatgggccgtggtttttgcggt
aaattgcagcggaagcaaaactctcagataaagtgctttgctgctcatgaagaagagata
atcacatctggatttgacaatacgatatccaggatctcttatcaagacggccagtgcaca
aacgaagagtctattggcgttggaaaccagccaaatgatctaagccttgcaccgctctca
ccaggtctccttctggtggcctttgagtcaggagttgtgtttctccgtggtgagaaagta
gtgtcaaccatcaaccttgggttcactgtcactgctttggctgtaacacctgatggaact
gaagctattgtcggtggtcaagacggtaagctccgtctgtatgctgttaatggtgattcc
ctcaccgaggaagcagttcttgagaaacacagaggcgccatcagcgtcattcgttactcc
ccggatttatctatgtttgcatcagctgatttgaacagagaagcagttgtatgggacaga
gcctccagagagatgaagctgaagaatatgttgtaccatagcgcccgcataaactgccta
gcttggtctccaaacagcagtatggttgctacgggatccttagacacatgtgtgattgtg
tatgaagtggacaaacctgcttccacacggatgaccattaaaggagctcacttaggtgga
gtttatggtctgggtttcgctgatgatacccatgttgtgagttctggtgaagatgcttgt
atccgggtttggagcttaactcctcaataa
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