KEGG   Brassica oleracea (wild cabbage): 106295473
Entry
106295473         CDS       T04124                                 
Name
(RefSeq) 66 kDa stress protein isoform X1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:boe04990]
    106295473
Domain-containing proteins not elsewhere classified [BR:boe04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   106295473
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st ANAPC4_WD40 CFAP251_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Tricorn_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_WDR75_1st PD40 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 106295473
NCBI-ProteinID: XP_013586840
LinkDB
Position
C5:complement(36808589..36815642)
AA seq 609 aa
MTLAETYACIPSTERGRGILISGDSKSDTMLYTNARSVVILDLNNPLKVSIYGEHAYPAT
VARYSPNGEWIASGDVSGTVRIWGARDDHVLKKEFKVLAGRIDDLQWSADGMRIVASGDG
KGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKFK
LSSREHSNFVNCVRYSPDGSKFITVSSDKKGVIYDGKTCEKLGELSSEDVHKGSIYAVSW
SPDGKEVLTVSADKSAKVWEISDSGNGTLKTTLTCPGSSGGVDDMLVGCLWQNDHIVTVS
LGGTISIFSASDLDKSPFQFSGHMKNISSLSVLRGSSDYILSGSYDGLICKWMMGRGFCG
KLQRKQNSQIKCFAAHEEEIITSGFDNTISRISYQDGQCTNEESIGVGNQPNDLSLAPLS
PGLLLVAFESGVVFLRGEKVVSTINLGFTVTALAVTPDGTEAIVGGQDGKLRLYAVNGDS
LTEEAVLEKHRGAISVIRYSPDLSMFASADLNREAVVWDRASREMKLKNMLYHSARINCL
AWSPNSSMVATGSLDTCVIVYEVDKPASTRMTIKGAHLGGVYGLGFADDTHVVSSGEDAC
IRVWSLTPQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgactcttgccgaaacctacgcctgcatcccttcgacggagaggggtcgcggaatcctg
atctccggcgactccaagtccgacaccatgctctacaccaacgcccgatccgtcgtgatc
ctcgacctcaacaaccccttgaaggtctctatctacggagagcacgcttacccagctacg
gtggcgcggtactcccccaacggagagtggatcgcgtcgggcgatgtctccgggacggtg
aggatctggggagctcgcgacgatcatgtgcttaagaaggagtttaaggtgttggctggg
aggatcgatgatctccagtggtcggctgatgggatgcggatcgttgcttctggtgatggc
aaaggaaagtctctagttcgtgctttcatgtgggattcaggatcgaatgtgggagagttt
gatggacattcaaggcgtgttcttagctgtgctttcaagcctaccagacccttccgcatt
gtaacttgtggagaggattttctggttaatttctacgaaggtcctcctttcaagttcaag
ctctcaagcagagaacattccaactttgtcaactgtgtgaggtattcaccagatggaagc
aagttcattactgtaagttcagacaaaaagggagtcatatatgatggaaagacttgtgag
aaactgggagaactctcatctgaagatgtgcataaaggtagcatctacgctgttagctgg
agtcctgatggcaaagaggtcctcactgtatctgcggacaagtcagctaaagtatgggaa
atctcggattctggtaacggaacattgaagaccacgttgacttgtccaggatcatcaggt
ggagtggacgatatgcttgtcgggtgtctgtggcagaacgatcatatcgtcactgtttct
cttggtggtacaatcagcatattctcagcaagcgatcttgataaatcccccttccagttt
tcgggacacatgaagaacatctcttccttatctgtgctcagaggaagttctgactacata
ctatccggtagctacgatggtctgatatgtaaatggatgatgggccgtggtttttgcggt
aaattgcagcggaagcaaaactctcagataaagtgctttgctgctcatgaagaagagata
atcacatctggatttgacaatacgatatccaggatctcttatcaagacggccagtgcaca
aacgaagagtctattggcgttggaaaccagccaaatgatctaagccttgcaccgctctca
ccaggtctccttctggtggcctttgagtcaggagttgtgtttctccgtggtgagaaagta
gtgtcaaccatcaaccttgggttcactgtcactgctttggctgtaacacctgatggaact
gaagctattgtcggtggtcaagacggtaagctccgtctgtatgctgttaatggtgattcc
ctcaccgaggaagcagttcttgagaaacacagaggcgccatcagcgtcattcgttactcc
ccggatttatctatgtttgcatcagctgatttgaacagagaagcagttgtatgggacaga
gcctccagagagatgaagctgaagaatatgttgtaccatagcgcccgcataaactgccta
gcttggtctccaaacagcagtatggttgctacgggatccttagacacatgtgtgattgtg
tatgaagtggacaaacctgcttccacacggatgaccattaaaggagctcacttaggtgga
gtttatggtctgggtttcgctgatgatacccatgttgtgagttctggtgaagatgcttgt
atccgggtttggagcttaactcctcaataa

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