KEGG   Brassica oleracea (wild cabbage): 106295548
Entry
106295548         CDS       T04124                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106295548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106295548
   03036 Chromosome and associated proteins [BR:boe03036]
    106295548
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     106295548
   Coactivators
    SAGA/TFTC/STAGA complex
     106295548
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     106295548
    STAGA complex
     106295548
    TFTC complex
     106295548
    SAGA complex
     106295548
    SLIK complex
     106295548
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 106295548
NCBI-ProteinID: XP_013586927
UniProt: A0A0D3CB17
LinkDB
Position
C5:complement(8455589..8458852)
AA seq 649 aa
MAEAIPSSSLSPKSLQSPNPMEPSPASSAPPPSSSQQQQQQHMTPPISNSAASPAMAAVT
NTEGAIQNSNSNPQPNPAAGAQIPSPSPLDQQAQTQQQLGGQTQQIMQQISSSSIPQLSQ
QQQQQILQQHMSPQQQIPMSNYHIAQSLQRSPSVSRLNQIQQQQQQQQQQQQGQYGSVLR
QQAGMYGTMNFGGSGSVQQQNQQMGNPNLSRAGLVGQSGHLPMLNGAAAQMNIQSQLLAA
SPRQKAGMVQGTQFHPGSSGQQLQGIQGMGMMNSLNLSSQMRGNPALYAQQQRINPAQMR
QQLSQQNALTSPQVQNLQRTPSSLAFMNSQLPGLAQNGQAGMMAQQQWLKQMSGITSPNS
QSFRLQQSQRQQALLLQQQMPSAQLHPNSMSLNQQQISQMLQQQQQQQSQMGQAQMNQSH
QQQQQLQQMQQTQQQQQMQQQMPINQQQPSPRMTSHAGQKSVSLTGSQPDATQSGTTTPG
GSSSQGTEATNQLLGKRKIQDLVSQVDAHAKLDPDVEDLLLEVADDFIDSVTSFACSLAK
HRKSSILEPKDILLHLEKNLHLTVPGFSSEDKHQTKNVPTDLHKKRLAMVRALMESSKPE
TNASNSKETNRQVMVNPNGQNHLLRPSPSSEQLVSQTSGPHMLQHMTRY
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggcggaagctattccttcatcgtctttgtcacccaagtctctccaatctcctaatcca
atggaaccttcccctgcatcctccgcacctccaccgtcctcatcgcaacaacaacaacaa
caacacatgacacctccgatctctaattccgcagcttctccggcgatggcggcggttacg
aacaccgaaggtgcaatccagaacagtaacagcaatccgcaaccgaacccggccgctgga
gctcagatcccgtcgccttctccgttggatcagcaggcccagactcagcaacaactcggt
ggtcagactcagcaaattatgcagcaaatctcctcctcctcgattccgcagctatctcag
caacagcagcagcagattcttcagcaacatatgagtccgcagcagcagattccgatgtcg
aattaccatatagctcagtctctccagcgatccccttctgtctctcgccttaaccaaatc
cagcagcagcagcagcagcagcagcagcagcagcagggtcaatacggtagcgttttgagg
cagcaggctgggatgtacgggacgatgaacttcggcgggtcaggttcggttcagcagcag
aatcagcagatgggtaaccctaatttgtctagggcaggtttggttggccaaagtggtcac
ttgcctatgcttaacggtgcagctgctcagatgaatattcagtcccaattgttggcagct
tcgccgaggcagaaagctgggatggttcaaggtacgcagtttcatccaggaagttctgga
caacagttacaggggattcaaggaatggggatgatgaattcacttaatttgagctcgcaa
atgagaggtaatcctgctctctatgctcagcagcagcgaatcaaccctgcgcagatgagg
cagcaattgtcacagcaaaacgctcttacttcccctcaggtccagaacctgcagagaaca
ccttcttccctcgcattcatgaattctcagctaccgggtttggcccaaaatggacaagct
ggcatgatggcgcagcagcaatggctgaagcagatgtccggaataaccagtcccaattca
caatctttccgcctccagcagagtcaaagacagcaggctctactcttacagcagcaaatg
ccctctgctcagttacacccaaattccatgtccttgaatcagcagcaaatatcacagatg
ctacaacagcagcagcagcaacaatcacaaatgggccaggctcagatgaaccaatcccat
caacagcagcaacaactacagcagatgcagcaaacccaacagcaacagcagatgcagcag
cagatgcccataaatcaacaacagccatctccaaggatgacgagccatgcagggcagaaa
tctgttagtttaacaggctcacaaccagatgcgacacagtcaggtacaacaacacctggt
ggtagttccagccaaggaacagaagcgacaaatcaactgcttggcaaaagaaagattcag
gatctggtttcgcaggtggacgcgcatgctaaattggatcctgatgttgaagacctcctt
ttggaggtagcggatgacttcattgattcggtgacttcatttgcatgtagcttggctaaa
caccgtaaatcatccatattggaaccaaaggatatattactccaccttgagaaaaacctg
cacttgacagttcctggattctcaagtgaggataaacaccaaacaaaaaacgtaccaact
gatctccacaagaagcgacttgcaatggtgcgtgccttgatggaatcctcaaaaccagag
acgaatgcaagcaattctaaggaaactaatagacaagtgatggttaacccaaatggtcaa
aaccatctcttaagaccatcgccaagttcagagcaattggtttcgcagacatccggtcct
cacatgttacaacatatgacacgctactaa

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