Brassica oleracea (wild cabbage): 106295548
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Entry
106295548 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106295548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106295548
03036 Chromosome and associated proteins [BR:
boe03036
]
106295548
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106295548
Coactivators
SAGA/TFTC/STAGA complex
106295548
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106295548
STAGA complex
106295548
TFTC complex
106295548
SAGA complex
106295548
SLIK complex
106295548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
106295548
NCBI-ProteinID:
XP_013586927
UniProt:
A0A0D3CB17
LinkDB
All DBs
Position
C5:complement(8455589..8458852)
Genome browser
AA seq
649 aa
AA seq
DB search
MAEAIPSSSLSPKSLQSPNPMEPSPASSAPPPSSSQQQQQQHMTPPISNSAASPAMAAVT
NTEGAIQNSNSNPQPNPAAGAQIPSPSPLDQQAQTQQQLGGQTQQIMQQISSSSIPQLSQ
QQQQQILQQHMSPQQQIPMSNYHIAQSLQRSPSVSRLNQIQQQQQQQQQQQQGQYGSVLR
QQAGMYGTMNFGGSGSVQQQNQQMGNPNLSRAGLVGQSGHLPMLNGAAAQMNIQSQLLAA
SPRQKAGMVQGTQFHPGSSGQQLQGIQGMGMMNSLNLSSQMRGNPALYAQQQRINPAQMR
QQLSQQNALTSPQVQNLQRTPSSLAFMNSQLPGLAQNGQAGMMAQQQWLKQMSGITSPNS
QSFRLQQSQRQQALLLQQQMPSAQLHPNSMSLNQQQISQMLQQQQQQQSQMGQAQMNQSH
QQQQQLQQMQQTQQQQQMQQQMPINQQQPSPRMTSHAGQKSVSLTGSQPDATQSGTTTPG
GSSSQGTEATNQLLGKRKIQDLVSQVDAHAKLDPDVEDLLLEVADDFIDSVTSFACSLAK
HRKSSILEPKDILLHLEKNLHLTVPGFSSEDKHQTKNVPTDLHKKRLAMVRALMESSKPE
TNASNSKETNRQVMVNPNGQNHLLRPSPSSEQLVSQTSGPHMLQHMTRY
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctattccttcatcgtctttgtcacccaagtctctccaatctcctaatcca
atggaaccttcccctgcatcctccgcacctccaccgtcctcatcgcaacaacaacaacaa
caacacatgacacctccgatctctaattccgcagcttctccggcgatggcggcggttacg
aacaccgaaggtgcaatccagaacagtaacagcaatccgcaaccgaacccggccgctgga
gctcagatcccgtcgccttctccgttggatcagcaggcccagactcagcaacaactcggt
ggtcagactcagcaaattatgcagcaaatctcctcctcctcgattccgcagctatctcag
caacagcagcagcagattcttcagcaacatatgagtccgcagcagcagattccgatgtcg
aattaccatatagctcagtctctccagcgatccccttctgtctctcgccttaaccaaatc
cagcagcagcagcagcagcagcagcagcagcagcagggtcaatacggtagcgttttgagg
cagcaggctgggatgtacgggacgatgaacttcggcgggtcaggttcggttcagcagcag
aatcagcagatgggtaaccctaatttgtctagggcaggtttggttggccaaagtggtcac
ttgcctatgcttaacggtgcagctgctcagatgaatattcagtcccaattgttggcagct
tcgccgaggcagaaagctgggatggttcaaggtacgcagtttcatccaggaagttctgga
caacagttacaggggattcaaggaatggggatgatgaattcacttaatttgagctcgcaa
atgagaggtaatcctgctctctatgctcagcagcagcgaatcaaccctgcgcagatgagg
cagcaattgtcacagcaaaacgctcttacttcccctcaggtccagaacctgcagagaaca
ccttcttccctcgcattcatgaattctcagctaccgggtttggcccaaaatggacaagct
ggcatgatggcgcagcagcaatggctgaagcagatgtccggaataaccagtcccaattca
caatctttccgcctccagcagagtcaaagacagcaggctctactcttacagcagcaaatg
ccctctgctcagttacacccaaattccatgtccttgaatcagcagcaaatatcacagatg
ctacaacagcagcagcagcaacaatcacaaatgggccaggctcagatgaaccaatcccat
caacagcagcaacaactacagcagatgcagcaaacccaacagcaacagcagatgcagcag
cagatgcccataaatcaacaacagccatctccaaggatgacgagccatgcagggcagaaa
tctgttagtttaacaggctcacaaccagatgcgacacagtcaggtacaacaacacctggt
ggtagttccagccaaggaacagaagcgacaaatcaactgcttggcaaaagaaagattcag
gatctggtttcgcaggtggacgcgcatgctaaattggatcctgatgttgaagacctcctt
ttggaggtagcggatgacttcattgattcggtgacttcatttgcatgtagcttggctaaa
caccgtaaatcatccatattggaaccaaaggatatattactccaccttgagaaaaacctg
cacttgacagttcctggattctcaagtgaggataaacaccaaacaaaaaacgtaccaact
gatctccacaagaagcgacttgcaatggtgcgtgccttgatggaatcctcaaaaccagag
acgaatgcaagcaattctaaggaaactaatagacaagtgatggttaacccaaatggtcaa
aaccatctcttaagaccatcgccaagttcagagcaattggtttcgcagacatccggtcct
cacatgttacaacatatgacacgctactaa
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integrated database retrieval system
