Brassica oleracea (wild cabbage): 106295558
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Entry
106295558 CDS
T04124
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106295558
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Gene cluster
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Motif
Pfam:
Sel1
TPR_11
TPR_27
Motif
Other DBs
NCBI-GeneID:
106295558
NCBI-ProteinID:
XP_013586943
UniProt:
A0A0D3CB60
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Position
C5:complement(8688104..8691153)
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AA seq
678 aa
AA seq
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MRISGYGIVILSVIVFYYLDRSVHARPVVLVLSNDDLNSGGDDPGVGDSSDFDEFGESEP
KSEEELDPGSWRRMFEPDDDSTVEAASPQYYSGLHKILSAASEGNDRLMEEAVDEIEAAS
SSGDPHSQSLMGFVYGTGMMREKSKSKSFLHHNFAAEGGNMQSKMTLAFTYLRQDMHDKA
VKLYAELAETAVNSFLISKDSPVVEPTRIHSGTEENKGALRKSRGEEDEDFQILEYQAQK
GNAAAMYKIGLFYYFGLRGLRRDHTKALHWFSKAVEKGEPRSMELLGEIYARGAGVERNY
TKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVEKKNYTKAKEYFEKAVDNEDPSGHYNLG
VLYLKGIGVKRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVA
ERGPWSSLSRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVS
GFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDYVRAAEAYMHAKSQSN
AQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALQSDAAAKLPVTLALASLWLRRNYADTFL
VRVVDSLPEVYPKVEAWIENVVFDEGNATILTLFVCLITILYLRERQRRQVVVPDPVGGD
VAQPLDAEVAQHLAAFPR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagaatctcaggctacggaatcgttattctctctgtaatcgtattctattacctcgat
cgtagcgttcacgcgcgtcccgttgtcctcgtcctctcgaacgacgatctcaacagcggc
ggagacgatcccggagtaggagactcctccgacttcgacgaattcggagaatccgaaccc
aaatccgaagaggagctcgatcccgggtcgtggcgacggatgttcgagccggacgacgac
tcaaccgtcgaagccgcgtcgccgcagtactactccggcctccacaagattctctcggcg
gcgagcgagggaaacgataggttgatggaggaagcggtggatgagatagaggcggcttct
tcgtccggagatccgcactcgcagtcgctgatgggattcgtgtacgggacagggatgatg
agggagaagagcaaaagcaaatccttccttcaccataactttgctgctgaaggtgggaac
atgcagtctaagatgacacttgccttcacgtatctgcgacaagatatgcatgataaagct
gtgaaactatacgctgaactagcagaaaccgctgtgaatagtttcctgatctcaaaggac
tctcccgtggtggaaccaactagaatccacagcgggactgaagagaacaaaggcgctcta
aggaagtcacgaggggaggaggatgaggattttcagatattggagtatcaggcacagaaa
ggcaatgctgcggctatgtacaagattggactgttctactactttggtctgcgagggtta
aggcgtgatcacaccaaggcgttgcactggttttcgaaggcggtggagaaaggagaaccg
aggtctatggaacttcttggggagatatatgctcgaggagctggtgttgagagaaattat
accaaggcgcttgaatggcttacacttgcggcgaaagaaggtctatattcagcgtttaat
gggattggctacttgtatgttaaagggtatggagtagagaagaaaaactacactaaggca
aaggaatattttgaaaaggctgttgacaatgaagaccccagtgggcattataaccttggg
gttctgtatcttaaaggcattggagtcaaaagggatgtgaggcaggcaacaaaatacttc
ttcgttgctgcaaatgctggccaaccgaaggctttctatcaactcgccaagatgttccat
actggagttgggcttaagaagaacctggaaatggcaacttcgttctataagttagtagca
gaaagaggaccatggagttctctctctagatgggcgcttgaagcttaccttaaaggagat
gtgggtaaggctttaatcttatactcgagaatggcagagatgggttatgaagtagcacaa
agtaatgctgcatggatcctcgacaaatacggtgaaagaagcatgtgcatgggagtatct
gggttttgcacagacaaggagagacatgagagagcacattctttgtggtggcgtgcatct
gaacaaggcaatgaacatgctgctctccttattggagatgcttattactatggccggggt
actgagagagattatgtgcgtgcggctgaggcatacatgcatgctaaatcacagtcaaac
gcgcaagcaatgttcaacctaggttacatgcatgagcatggacaagggcttccctttgac
ctgcatctagcaaaacgttactacgatcaagcacttcagagcgatgcagcagctaaattg
ccagtcacacttgctctcgccagcttatggctacgtagaaactatgctgataccttcctg
gtgagagttgtggactcattgccagaagtgtatccaaaggtagaggcttggattgagaat
gtggtgtttgacgaaggtaacgcgacaatcctcacactttttgtctgtcttattacgatt
ctctatctccgagagagacaacgaagacaagttgttgtccccgatcctgtgggaggcgat
gtggctcaacctctcgatgctgaggtggcacaacacctggctgcattcccacggtga
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