KEGG   Brassica oleracea (wild cabbage): 106295591
Entry
106295591         CDS       T04124                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106295591
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106295591
Enzymes [BR:boe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106295591
Protein phosphatases and associated proteins [BR:boe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106295591
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106295591
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel Serglycin
Other DBs
NCBI-GeneID: 106295591
NCBI-ProteinID: XP_013586980
LinkDB
Position
C5:complement(20402760..20407676)
AA seq 830 aa
MEHLSVAQSQSEINEDMSLKNHPPDKDTDKDTSMEQPTSPRHRKVLARWLPDEAQRPIVD
EAPVFSPSLEEFEDTLAYIEKIRPLAEPYGICRIIPPPTWTPPCRLKEKTIWEHTKFPTR
IQNVDLLQNREPMKKKPKSRKRKRRRNSRMGSSRRRSASASASGSGSGSSPSEPASSPEA
EEKFGFNSGSDFTLEEFEKYAQHFREAYFEKKDSVGETKFTPSVEDIEGEYWRIVEQPTD
EVEVYYGADLENVVLGSGFYKKGDRDMDQYVVSGWNLNNLPRLPGSVLSFEDCNISGVLV
PWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEE
QPDLLHGLVTQFSPSILKDEGVQVYRVVQNAGEYVLTFPRAYHAGFNCGFNCAEAVNVAP
VDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASSVGNESTTNLRWKS
FCGKNGTLTNAVQARLRMEEERLADIDRESSSLVKMEKDFDSNCERECFSCFYDLHLSAS
GCKCSPDEYACLKHSDDLCSCEEKDRFVLLRYTMDELSSLVRALEGESDDLKIWASKVLG
VQHSDEYQNKTISVIKEEEDKKLKEGSFDLNIDLELDCLENPKEEEVSTSGEINTSENFS
ASVEPINLGFLIFGKLWCNKHAILPKGFTSRVKFYNVLDPTRMSYYISEVLDAGLMGPLF
RVTLEESPDESFFNVSAQQCWEMVLQRVKHTSTNLGLTTLPRLESINGLQMFGLLSQSTV
QAIEALDPNHRLIEYWNHKNQTQSESKDHFISSNCSVSLTKGKLFGVDLM
NT seq 2493 nt   +upstreamnt  +downstreamnt
atggaacatctcagtgttgctcaatcacaatctgagatcaacgaggatatgtctctgaag
aatcatccaccagacaaggatacggacaaagacactagcatggaacaacctactagtcca
cgtcatcgaaaggttcttgctagatggttaccagatgaagcgcagagaccaatcgttgat
gaagctcctgttttctctccatcattagaggagtttgaagatacacttgcatatatagaa
aagatacgtccactagcggagccatatggtatctgtcgaatcatcccaccaccaacatgg
acgcctccttgccggcttaaggagaagactatatgggagcataccaagtttcccactcgg
atccagaacgtggacctgcttcagaaccgggaacccatgaagaagaaaccaaagagcagg
aaacgtaaacggagaagaaactctaggatgggttcctctaggagacgatctgcttctgct
tctgcttctggctctggttctggttcttctccctctgaacctgcttcctctcctgaggcc
gaggagaagttcggctttaactcgggttcagactttactctggaagagtttgagaaatac
gctcagcattttagagaggcttactttgagaagaaagactctgttggtgaaacaaaattc
acaccgtctgtggaggatatcgaaggcgagtactggcggatagttgaacaaccaacagat
gaagttgaggtatattatggagctgacttggagaacgtggtacttggaagcgggttttac
aagaaaggggatagagatatggatcagtacgtagtctctggctggaacttgaataactta
ccgcgtctccctggctctgttctctcttttgaggattgcaatatctctggtgttctagtc
ccatggctctatgtaggaatgtgtttttcttcattttgttggcatgtggaggaccatcat
ctgtattcactaaattatcatcactttggggagccaaaagtatggtatggtgttccagga
agcaatgcaaccgcactcgagaaggcgatgagaaaacatctacctgatctgtttgaagaa
cagcctgatctacttcacggcctggttactcaattttcaccttcaattctaaaagatgag
ggagtccaggtttatcgtgtggttcagaatgcaggggagtatgtacttacattcccgagg
gcgtatcatgctggattcaactgcggtttcaactgtgcagaagcggttaatgttgctccg
gttgattggttggctcatggacagaacgctgtggagctatacagtaaagagacgaggaag
acctctctctctcatgacaaacttctcctcggagcagcttatgaagctgtaaaggctctt
tgggaactctcagcttcttctgttggaaatgaaagcacgacaaacttgagatggaagagt
ttctgtgggaagaacggaacacttaccaacgcggtccaggctcggttacgtatggaagag
gaaagacttgcagatattgatagggaatcttcgagcttggtgaagatggagaaggacttt
gattcaaactgtgaaagggaatgcttctcatgcttttatgatttgcatctctctgcttct
ggctgcaagtgctcgcctgatgaatacgcgtgtcttaaacactcggacgatctgtgttca
tgtgaagagaaggatagatttgtcctcctccgttacaccatggatgagttaagctcgttg
gtgagagcattggaaggggaatcagatgatttaaagatatgggcttccaaggtgttaggt
gttcaacacagtgatgaatatcaaaataagacaatttcagttatcaaggaggaggaggac
aagaagctaaaggaaggttcgtttgatctgaacatcgacttggagttggattgtctggaa
aaccctaaagaagaagaagtcagcaccagtggcgagataaacacttcagagaactttagt
gcatcggtggagcctataaacctcggtttcttgatttttggaaagctttggtgcaataag
catgctattttgccaaaaggattcacaagtcgtgtcaagttctacaacgtgcttgatcca
acaagaatgagctattacatctctgaggttttggatgcaggactcatgggcccattgttc
agggttactctggaagaatctccagacgagagcttcttcaatgtctcggcccaacaatgc
tgggagatggtgttgcagcgagttaaacacacatccacaaatcttggtcttactacttta
ccgcggcttgaaagtattaacgggcttcaaatgtttggtctcctctcgcagtctacagtt
caggccattgaagctcttgacccaaaccatagactcatcgagtactggaaccacaagaac
caaactcaatctgaatcaaaagatcacttcatatcatcaaactgctccgtgagtcttacc
aaaggaaaacttttcggagtggatttgatgtaa

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