Brassica oleracea (wild cabbage): 106295627
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Entry
106295627 CDS
T04124
Name
(RefSeq) protein TRANSPARENT TESTA 12-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106295627
Transporters [BR:
boe02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
106295627
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
106295627
NCBI-ProteinID:
XP_013587034
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Position
C5:complement(32128466..32133647)
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AA seq
511 aa
AA seq
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MDSSQYDGVYQPLLYPPADGTVPLSPSTESSNGELERVLSDVETPFFHRLREATMIESKL
LFKLAAPAVIVYMINYLMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVE
TLCGQAFGGRKYEMLGIYLQRSTVLLTLTGLLLTLIYVFSKPILLFLGESPEIASAASIF
VYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISTATLFVHLLLSWLSVYKLGMGLLGAS
LVLSLSWWIIVVAQFVYIVTSERCRQTWRGFSVQAFFGLPSFFKLSAASAVMLCLETWYF
QILVLLAGLLENPELALDSLSICMTIPGWVFMISVGFNAAISVRVSNELGAGNPKSAAFS
VIIVNIYSLITSVILAIVILACRDFLSYAFTEGKKVSAAVSDLFPLLALTLVLNGIQPVL
SGVAVGCGWQAFVAKVNVGCYYIVGIPLGVIFGFYFNFDAKGIWTGMICGTLIQTVILAW
VTFRTDWTKEVEEASKRLDKWSNKKLEVVPE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctcaatacgatggcgtataccaaccgcttctctaccctccggctgatgga
acggtaccgctttctccatcgacggagtcaagcaacggcgagctagagagagtgctttcc
gacgttgaaactccgttttttcaccgccttcgtgaggccacgatgattgaatccaagctg
ctcttcaagcttgctgcacctgcggtcatcgtctacatgataaactacctcatgtccatg
tccactcaaatcttctctggccatctaggcaacctagaactcgccgccgcttctcttggt
aacactggaatccaaatcttcgcctacggtctcatgctaggaatgggtagtgcggtagag
acgttgtgtggtcaagcgtttggaggtagaaaatacgagatgcttggcatttatctccag
agatccaccgtcttgcttactctcacgggccttctcctaacgttaatctacgtcttctcc
aaacctattttgcttttcctcggagagtcgccggagatagcttccgccgcgtctatcttt
gtatacggcctaattcctcaaatctttgcctacgccgtaaacttcccgatccaaaagttc
ctccaggcgcaaagcatcgtggcaccgagtgcttacatctctacggccactctctttgtt
caccttctcttaagctggctctctgtttacaagcttggcatggggcttcttggagcgtcg
ctcgtgcttagtctctcgtggtggattatagtggtggctcagtttgtttacatcgtgacg
agtgaacggtgtcgtcagacgtggagagggtttagtgtgcaagcgttttttgggttaccg
agttttttcaaactctccgccgcctccgccgtgatgctttgccttgagacttggtatttt
cagatcttggttcttcttgccggactcctcgagaatccggagcttgctctagattctctc
tccatttgcatgacgattccaggatgggtgtttatgatatctgttgggttcaatgcagcg
ataagtgtaagagtgagtaatgaacttggagctggaaaccctaaatcagcagcgttttct
gtaatcatcgtcaacatatattccttaattacaagtgtgatcttagccattgttattttg
gcatgccgtgactttttgagttatgcgttcactgagggtaaaaaagtttcggccgcggtt
tctgatcttttcccgctacttgccttgacgcttgttctcaatggaatccaacccgttctt
tctggtgtggcggttggatgcggttggcaagcgtttgtggcgaaagttaacgttggatgt
tattacattgtcggaattcctcttggggttatctttgggttttacttcaatttcgatgcc
aagggtatatggaccggaatgatatgtggtacccttatacaaaccgttattttagcgtgg
gtcacgtttagaacagactggacaaaagaggtggaagaagcttctaaaaggttggacaaa
tggagcaacaaaaaactagaagtggttcccgaataa
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