Brassica oleracea (wild cabbage): 106295646
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Entry
106295646 CDS
T04124
Name
(RefSeq) LIMR family protein At3g08930-like
KO
K14617
LMBR1 domain-containing protein 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
106295646
04980 Cobalamin transport and metabolism
106295646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106295646
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106295646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
CCSMST1
DUF7801
Motif
Other DBs
NCBI-GeneID:
106295646
NCBI-ProteinID:
XP_013587060
UniProt:
A0A0D3CLT1
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All DBs
Position
C5:complement(43459132..43462734)
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AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKELWLAVYIVDAILVFFVIPFAMFFYEGDQDKSLG
KRIKSSLLWVVSTAVVCALVLGILYGVIGKVDFTVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWTMRTTFPEYVVALATIVGSVLFTIFGGVGIASLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKDGAKGRKWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKAETAWAFTVLGYLAKFILGIIGLIVSIAWVAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VILAGLTFLYYITFGWRRKKPSARFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgattgtcgcgatcgtcgtctgcgtcatcgtcttc
atctccagcatctacctcctcgtcaattaccagcatccagacgacgcgaaccaggcctac
ttccccaaattcgtcgtcgtcttcggcctctccatcgccatgatctcgattctcatgttg
ccggcggacgtggcgaatcggcacgcttgccggcacgctatctacaacggtgcttgtaat
ctcactttgcccatgaaggagctatggcttgccgtttacatcgtggacgctatcctcgtc
ttctttgtcatccccttcgcaatgtttttctatgaaggcgaccaggacaagagtttggga
aagaggataaaaagttccttgctttgggtcgtaagcacggctgttgtttgtgctctggtg
cttggaatcttatacggtgttattggaaaggtggacttcactgtcaggcacttggcttct
gggacgacctctttccctacttcatggcaattttcaaataatcaaccatgtattggtaac
accgctcgccagtgctcagcatttacagctagcgtcgcgtctgagaaaacgtggaccatg
cgtactacttttccagaatacgttgtcgctcttgcgacaattgttgggtcagttcttttc
acgatattcggtggcgttggtattgcctccctaccattaggacttatcactgctttcatc
cggcgaccaaaggctgttattactcgatcacaatatataaaggaagcaactgaactaggg
aaaaaggctagagaactaaagaaagcagctgatggacttcgccaggaagaaaaagatggt
gctaaaggcaggaagtggaggaagaatgtgaaagcagttgaaaaggagttgctccaattg
gaagaagatgtgaacctcttagaagaagcgtatcctcaaggagagaaggcagaaactgca
tgggcttttactgtacttggatacttggccaagtttattcttggaatcataggattgatc
gtttccattgcttgggttgcacacatcatcatatatctacttgtggaccctcctctctcc
ccttttcttaacgaggttttcattaagcttgatgacgtttggggtcttctaggcactgcc
gcctttgctttcttctgtttctaccttctacttgctgtcatcgctggggcaatgatgctg
ggtttgaagctcgtcttcattaccattcatccaatgaaatggggagctactctaatgaac
tctttcctcttcaatgttggcctcattcttctttgctccatcagtgtgattcaattctgc
gccactgcctttggatattacgcacaagccactgctgcacaagagatcttcggtcacacg
ttgcagtctcttagaggaattaagtacctctacaagtacaacgtgtttcaaatcgggttt
gttatcctggctggactgacctttctatattacattaccttcggatggagaagaaaaaag
ccaagcgcccgtttccagctctcttcttaa
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