Brassica oleracea (wild cabbage): 106295717
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Entry
106295717 CDS
T04124
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106295717
Membrane trafficking [BR:
boe04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
106295717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
MCPsignal
Prominin
TMPIT
RHA1_ro05818_N
PhaP_Bmeg
CCDC-167
Vps53_N
Occludin_ELL
PCRF
Motif
Other DBs
NCBI-GeneID:
106295717
NCBI-ProteinID:
XP_013587145
UniProt:
A0A0D3CJB4
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All DBs
Position
C5:37558660..37561280
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AA seq
271 aa
AA seq
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MACNIPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQTKQLEELTDKMRDCKRLVK
DFDRELKDEEASNPPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKIELFDMGAGP
SAEPTPEDNVQVASAMSNQELVDAGMKRMDETDQAIQRSKQVVEQTLEVGTQTAANLKGQ
TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMMFLFLIVCGVIAIIVVKIVNP
NNKDIRDIPGLAPPAQSRKLLYLRNPEYMGR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtaatatcccgatgagcccccaattggagcagatccatggcgaaatccgtgac
cacttccgagccctcgcgaatggtttccagaggttggataagatcaaggattcaactcga
caaaccaagcaactcgaggaactcactgacaagatgcgagactgcaaaaggttggtcaag
gattttgaccgtgaactcaaggatgaggaagctagtaatcctcctgaagtaaataagcaa
ttgaatgatgagaaacagtctatgattaaggaactcaattcttatgttgctctaagaaaa
acgtatatgagtacccttggcaacaagaagattgaactttttgatatgggagctggaccc
agcgccgaacctacacctgaggacaatgttcaagtcgcttcagctatgtcaaaccaggag
cttgttgatgctggaatgaaaagaatggatgagactgatcaggccattcagcgctcaaaa
caggttgtagaacaaacactagaagttggaactcaaactgcagctaatttaaagggacag
acggatcaaatgggacgcgttgtgaaccacttagacacgattcagttctctatcaagaaa
gcatcacagcttgtgaaagagatagggagacaggtggctacggataaatgcataatgatg
ttcctgtttctcattgtatgcggtgtgatagccattatcgtagtgaagatcgtcaacccg
aataacaaggacatcagggacatcccaggattagctcctccagcgcaatcgaggaagcta
ctatacttgaggaatccggagtacatgggaagatag
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