KEGG   Brassica oleracea (wild cabbage): 106295735
Entry
106295735         CDS       T04124                                 
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Module
boe_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106295735
Enzymes [BR:boe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     106295735
SSDB
Motif
Pfam: Glyco_hydro_28
Other DBs
NCBI-GeneID: 106295735
NCBI-ProteinID: XP_013587161
LinkDB
Position
C5:8328288..8329455
AA seq 254 aa
MNRRLPANMAFDFVRKSRINGLISLNSKSEHLNFFCVDHFNISHVNLTAPGNSPNTDGIK
IGMSNNVKIRDSHIGSGDDCIAILSGKTNFDIHNITCGPGHGISAGSLGKHKEEKNVENV
RVRDTVFTGTSAGIRFKTWESSVAEITVSGFLYENIKMVDVRHDIVNIDQKYCPYPPCLK
LGDSHVQIRNVTFKNIWGTSRDKVAVKXKSFPCKDIQLIDINLIHNGSDGPATALCEYVN
GSARGKMFPPSCLN
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaatcgtagactaccagcgaacatggcattcgatttcgtgagaaaatcaagaattaat
ggactaatatcactcaacagcaaatcggaacacttgaacttcttctgcgtagatcatttc
aacatctctcacgtcaatttaacggctcctggaaacagccccaacactgacggaatcaag
attggtatgtccaacaacgttaagattcgggacagtcacattggttccggagacgattgt
atcgcaatcctctctggaaaaactaactttgatatccataacatcacttgtggtcctgga
catgggatcagtgccggaagcttgggaaagcacaaggaagaaaagaacgtcgagaatgtt
agggttagggacacggtttttactgggacaagcgccggtataaggttcaagacatgggaa
tcttcggttgctgagatcaccgtttcgggattcttgtacgagaatatcaagatggttgat
gtccgacacgacatcgtaaacatcgaccagaagtattgtccttacccaccgtgcctgaaa
ttaggagactctcatgttcagatcagaaacgtgacgtttaagaatatttggggaacatcg
agggacaaagtggctgtaaagnntaaaagctttccatgcaaagatattcagttaattgac
atcaacttaatacataatggatctgacggtccagccaccgcgttgtgtgagtacgttaat
ggttctgctcgtggcaagatgtttcctccgagttgtttaaactga

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