Brassica oleracea (wild cabbage): 106295864
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Entry
106295864 CDS
T04124
Name
(RefSeq) pre-mRNA-splicing factor ISY1 homolog
KO
K12870
pre-mRNA-splicing factor ISY1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106295864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106295864
Spliceosome [BR:
boe03041
]
Complex B
Other components
Prp19-related factors
106295864
Complex C
106295864
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Isy1
ATG31
Motif
Other DBs
NCBI-GeneID:
106295864
NCBI-ProteinID:
XP_013587310
UniProt:
A0A0D3CIQ6
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Position
C5
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AA seq
296 aa
AA seq
DB search
MARNEEKAQSMLNRFVTMKESENKKPKERRPYLASECRDLADADKWRHQIMREISRKVAE
IQNEGLGEHRLRDLNDEINKLLRERWHWERRIVELGGPNYNRHGAKMTDLEGNIIDVPNT
SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDEEDGVLEGL
ERSAEGEMRRREVEEWRRLDEVRKEARKGAAEVVSVGAAKEVLFEEEEDVVEEERKEREK
EEEKEREFVVHVPLPDEKEIEKMVLQKKKMELLREYASDDLVEQEKEAKAMLNIHR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaacgaggagaaagcgcagtcgatgctcaacaggttcgtcaccatgaaagag
tccgagaacaagaaaccaaaggagcgtcgaccttacctcgcctccgagtgcagagatctc
gcagacgcggacaaatggaggcaccaaatcatgcgagagatcagccgcaaagtcgccgag
atccagaacgaaggactaggcgagcaccgcctccgcgacctcaacgacgagatcaacaag
ctcttgagagagagatggcactgggagcgacggatcgtcgagctgggaggtcctaattac
aacagacacggcgcgaagatgacggatctcgaaggaaacatcatcgacgttcccaacact
agcggacgtggccctggctaccgttacttcggcgcggcgaagaagcttcctggtgtgaga
gagcttttcgagaagccgcctgagctgaggaagaggaggacgaggtatgatatctataag
aggatagacgctagctactatggttatagggatgaggaggatggggtgttggaggggctg
gagaggagtgcggagggggagatgaggaggagggaggtggaggagtggcggaggctggat
gaggttaggaaggaggcgaggaagggggcggcggaggttgtgagcgttggagctgcgaag
gaggtgttgtttgaggaggaggaggatgtggtggaggaggagaggaaggagagggagaaa
gaggaggagaaggagagggagtttgtggttcatgttcccttgcctgatgagaaggagatt
gagaagatggtgctgcagaagaagaagatggagttgcttagagagtatgctagtgatgat
ttggttgagcaggagaaggaggctaaagccatgctcaacatccacagatag
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