Brassica oleracea (wild cabbage): 106296038
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Entry
106296038 CDS
T04124
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106296038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106296038
Spliceosome [BR:
boe03041
]
Complex B
Other components
RES complex
106296038
Complex C
106296038
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
106296038
NCBI-ProteinID:
XP_013587534
UniProt:
A0A0D3CGW9
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Position
C5:complement(29903849..29906840)
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AA seq
557 aa
AA seq
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MAAPRTGVKSMKDYLKKYESSEVIEKKKKKKMKKPSKPEPTGVLVVDEDPVWQKQVDPQE
EQDNENDSAEERPVVDEDIEVKRMRRLEEIKARRAQNAIAEDGSGWVSLSSDQGGCDDQR
SDDISPPRRQRTRNDSPSPEPGPRGSLPETDMSPPRRRKRHYTPSPEPNRQHAKPVSLDS
DLTPPRKRRARNDSPSPEPEDTAPKSLGEDLSPPPNRCVHPVSPERSGKRSDSLELDGDL
SPPRRKKDSLASDVNKKSNDLSPPRRRRYHSPSPEPGRKPSKSLGSNSDLSPPRRSVSVK
GSRDSDLSPQRKTVSRSSNFGSSPPRRPRRESPPPQTSKEQRKTGLISGKDIGSEYRKKK
EDEQLRFKNMDSELTGQNAEAVFRDKITGKRITKEEYLQSKQKKVIEKPKEIKLEWGQGL
AQKRDAEARLQELELEKDKPFARTRDDPELDQMMKERVRWGDPMAHLVKKKQYEAPLMDL
GDNEEMKKSGFVIPQSIPKHSWITRGLEAAPNRYGIKPGRHWDGVDRSTGHEKDRFKKTS
EKKATEREAYLWSVSDM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccaagaacaggggtgaaatctatgaaagattacttgaaaaagtatgaaagt
agtgaggtcatagaaaagaaaaagaagaagaagatgaagaagccatccaaacctgaaccc
actggtgttttagttgtggatgaagatccagtttggcagaagcaggttgatccccaagag
gagcaagataatgaaaatgattcagctgaggaaagacctgtggttgatgaggacattgaa
gttaagagaatgcggaggttggaggaaatcaaggcaaggcgtgctcaaaatgccattgct
gaggatgggagtgggtgggtgagtttatcttcagaccagggcggctgtgacgaccaaaga
tctgatgatatttctcctccaaggagacagaggactcgtaacgactctccatctcctgag
cctgggcccaggggttcacttcctgaaacagacatgtcaccaccacgtcggagaaaacgt
cattatacaccttcccctgaacctaacagacaacatgccaagcctgttagtttggattct
gatttgacaccacctcgcaaaaggcgagccaggaatgattcaccttcaccagaacctgaa
gatacagcccccaaaagtctgggtgaagatctgtctcctcctccgaacagatgtgttcat
cctgtatcgcctgaaagaagcggaaagcgttcagattctcttgagttggacggtgattta
tctccccctcgcaggaaaaaggattcacttgcctcagatgttaacaaaaagagcaatgat
ctttctcctccacggagaagacgatatcattctccatcacctgaacctggtagaaagcct
tcaaaatctcttggctcgaactctgatttatctccaccacgcaggagtgtgagtgtgaag
ggttcccgagactcggatctttcgcctcaaaggaaaactgtgtcgaggagttccaatttt
ggtagctctccaccaaggagaccgcgcagagaatcaccacctccccaaacaagcaaggag
caacggaagactgggctaattagtggcaaagacattggaagtgaatatcgaaagaagaag
gaggatgaacagctgaggtttaaaaatatggattccgagctaactggtcagaatgcagaa
gcagtgttccgtgacaagattacagggaagcgtataacgaaggaggaatatcttcaatca
aagcaaaagaaagtcatagagaagccaaaggagatcaaattggaatggggccaaggttta
gctcagaagcgtgatgctgaagctagactacaggaacttgagcttgagaaggataagcca
tttgctcggaccagggatgatcccgagcttgatcaaatgatgaaagaaagagttagatgg
ggagatccaatggctcatttggtgaagaaaaagcagtacgaggcacctcttatggatctt
ggggacaacgaggagatgaaaaaatccggatttgtaataccacaaagtatcccaaagcac
agctggataacaagaggattagaagctgcacctaatcggtatggaatcaaacccggtaga
cattgggatggagttgaccgcagtactggccatgagaaggacaggtttaagaagacaagt
gagaaaaaagcaacggaaagagaagcgtacctttggtctgtttctgatatgtga
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