Brassica oleracea (wild cabbage): 106296153
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Entry
106296153 CDS
T04124
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106296153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106296153
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106296153
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106296153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
MTPAP-like_central
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
106296153
NCBI-ProteinID:
XP_013587675
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All DBs
Position
C5:complement(44371865..44374753)
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AA seq
513 aa
AA seq
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MRRGGERYTGLPPYMAELEQECSVSLRQLMVNEGLIPSPEDDKKRRSVIHMLQRIVVRWI
KIVAWKRRLPQHHINATNATIIPYGSYGLGVHGSESDIDALCIGPFFATITEDFFIDLHD
LLKSRAEVSEVHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDD
TSWRSLSGVRANQCILQIVPSVELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF
VCGYNPNATLSSLVASFFSTFAYWQWPTPVVLLRDAYAATGSPPGLMPIQLPCGGRQYCN
SNVTRSTYCKIMSEFHRGHHLTKGYLKHGFNWNSLFEPYPYATTYAWFVKIHLSASNEED
LSDWVGWVKSRFRSLLIKIEEVFGLCDPNPTEHLEACEKQPNIVYYWGLHLRTVNVSDIE
SVETDFLKNVNNSGSFQGSVGGIQLSVVQTSQLPKNVECDTSNRNKRVTRTCWRVRDDNH
CKDKPVYSRHLPGYVVGYEKINDRDAESTDVKC
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaggaggcgagagatatacaggtttgcctccttacatggctgaattagaacaa
gaatgctctgtttcgcttcgtcagcttatggtgaatgaaggactcattccatctcctgaa
gatgacaagaaacgaagaagcgttattcatatgctacaaaggatagtagtgagatggatt
aagatcgttgcttggaaacgacgtcttcctcaacatcatatcaacgcaaccaacgccacc
ataatcccttatggatcctatggtcttggggttcatggttctgaatcagacattgacgct
ttgtgcattggtcctttcttcgccactataaccgaggattttttcatcgacttgcatgat
ctgttaaaaagtagagccgaagtttcagaggttcactgtgttaaagatgctaaagtccct
ctcatccgcttcaaatttgatggcatcttggttgatcttccatacgctcagcttcgagtc
ttatcaatcccaaacaatgtagatgtgctgaaccctttcttcttgagagacattgatgac
acaagctggagaagcttgtctggagttcgcgcaaatcaatgcatccttcagatagtgcct
tccgttgagttgtttcaatcattgctgcggtgtgtgaaactatgggcaaagaggcgtggt
gtatacggtaacttgaatgggttccttggaggagttcatatggctatccttgcagcgttt
gtctgcggatataaccccaacgctacgttgagttcccttgtggcgagtttcttcagcacg
tttgcttattggcagtggcctacaccagtggtgctgctgagggatgcttacgcagctact
ggctctcctccagggctaatgcctatccagttgccttgcggtggacgtcagtactgcaac
tccaacgtaacgaggagcacgtattgcaagatcatgtcagagtttcaccgagggcatcat
ttgactaagggttacttgaaacatggctttaactggaacagtttgtttgagccttatccg
tatgcaaccacgtacgcttggttcgtcaagatacacctctctgcttctaatgaggaagat
ctgagtgattgggttggttgggttaagtcacgtttccgctctctactgatcaaaatagag
gaagtctttggactttgtgatccaaacccaacagagcatttagaagcctgtgagaaacag
ccaaacattgtatactactgggggttacatctcagaaccgtaaatgtttcagacattgaa
tccgtggagacagactttctgaagaatgtcaacaacagcggaagcttccaaggatcagtt
ggtggaatccagttgtcagttgtgcaaacgtctcagcttcctaagaatgttgagtgtgat
acaagtaacagaaacaagagggtgacaaggacgtgttggagagtccgggatgataaccac
tgcaaggataaaccggtttactcaaggcatttgcctggttatgtggttgggtatgagaag
attaatgacagagacgctgagagtactgatgttaagtgttag
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