Brassica oleracea (wild cabbage): 106296245
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Entry
106296245 CDS
T04124
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106296245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106296245
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
106296245
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
106296245
NCBI-ProteinID:
XP_013587784
UniProt:
A0A0D3CV94
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Position
C6:complement(23513757..23516120)
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AA seq
663 aa
AA seq
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MEGRDDGGGKVIGLIEKATKSSAQEVDPRLLKAIKSTLRYSDSEVRLGAKTLMELMKHNH
SQVRLLTLLIIDELFMRSKLFRTLIVEKFDQLLSLSVGFRNSLPLPAPPAVATTLRTKAI
EFLEKWNLSFGLHYKEIRLGFDYLKNTLKLKFPDLQATAARRQRERLEREERTKEILRSK
FESLRDGFGVLKGEIEETIKEIKEGLEIVQWRGDDGVPLAILDEEDYEEIRCSHLRQIRM
DSLKQSDKVEETSENRVVFDVLREQGKLLMKKHLVSVQDGISLLIRVDVNDNRTRDSMLK
ELIDIRNSILATEKKCEQAGFIISRMIDIPEKEEDEEEDIWEEDDGKVGSDPVKKVAPLP
RVQNGEGSSLQSSSEANRSTLESISNKASSTKKVRRSGDPLRDKLISEAPVMSWGAQLSN
WDSTTEVRANHRGLEVESHWGRVDQDAVIPADKIAALNLQATVYREERTEIPPCHAPLKK
GGLCQRRDLRACPFHGPIVPRDDEGNPIIIDESQNQTSSSPGINQEDVSMDETTSDSDPN
QLARQIAKQALKNIREKDREELRKIAKRAKHAKVKEHNFSVLRDAALASTSKSAVIDEEF
DRVFAERKNKKQTFSLARRKKTTTAKDRISERLLSNRAKGTKPKQLPQGNDDEKYRETSA
NQW
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagatgacggcggaggaaaagttatcgggttgatagagaaagctaccaaa
tcgtctgcgcaagaggttgacccgaggctcctcaaggcgatcaaatcaactcttcgctat
tccgattcggaggtccgactcggtgccaaaaccctaatggagctcatgaaacataaccac
tctcaggttcgattattgacgcttctcatcatcgacgagctattcatgagatcaaagcta
ttcagaacactaattgtcgagaagtttgatcagctcttgagtttaagcgttgggtttaga
aacagcctgcctcttcctgcgccacccgctgtcgccaccactttgcgtacaaaggctatt
gagttcttggagaagtggaatttgtcatttgggttacactacaaggagattaggcttggt
ttcgattaccttaagaacaccctcaagctcaagttccctgatctgcaggcaaccgctgca
cggagacaaagagagaggcttgagagagaggagaggacgaaggagattttgagaagcaag
tttgagtctttgagggatgggtttggagtcttgaagggtgagattgaggagacgataaag
gagatcaaggagggtctggagattgttcagtggagaggggatgatggtgttccacttgcg
attttagatgaggaagattacgaggagattcggtgttctcatctgaggcagattcgtatg
gattcgctgaagcagtctgataaggttgaggaaactagtgaaaacagagtggtgttcgat
gtgttgagggaacagggcaagcttctgatgaaaaagcatttggtctcggttcaagatggg
atctcacttctcatcagggttgatgtaaatgataacaggaccagagattccatgttgaaa
gagttgattgatattaggaatagcatattagcaactgagaagaaatgtgagcaagctggt
tttataatctcgagaatgattgacattccagagaaagaagaagatgaagaagaagatatc
tgggaggaagatgatggtaaggttggatctgatccagtcaaaaaggtggctcctttgccg
agagttcaaaacggtgagggttcgtccttacaatcatcaagtgaagcaaataggtctaca
ctagaatctatctccaacaaggcgtcgagtactaaaaaggttagaagaagtggtgatcct
cttagggataagctaatttctgaagcaccggtgatgagttggggagcacagctgagtaat
tgggactcaactacggaagttcgagctaaccaccgaggcttagaggtagagagccactgg
ggcagggtggatcaagacgctgtaattccagcagataaaatagcagcactgaatcttcag
gcaactgtctatagagaagagagaacagagatacctccatgccatgctcctctgaagaaa
ggtggtctttgtcagagaagagacctacgagcctgcccgtttcatggacccattgtacct
cgggatgatgaaggaaaccccataatcatagatgagagtcaaaaccaaacctcttcgagt
ccagggatcaaccaggaggatgtttctatggatgaaacaacttcagattctgatcctaat
cagttagctaggcaaatagcgaaacaagctctgaagaatatcagggagaaagacagagaa
gagttgaggaaaatagcaaagcgagcaaagcatgctaaggttaaggaacataacttttca
gttctgcgtgatgctgctctagcctcaacttctaaatcagctgtcatcgacgaagagttt
gatagagtttttgctgaaaggaaaaacaagaagcaaaccttttccttggcacggcgtaag
aagacaacaacggctaaagatagaatatcagagagactgttaagtaaccgggcaaaaggt
actaaaccgaagcagttgcctcagggcaatgatgatgagaagtaccgggaaacatcggct
aaccagtggtaa
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