Brassica oleracea (wild cabbage): 106296279
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Entry
106296279 CDS
T04124
Name
(RefSeq) UPF0505 protein
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106296279
Membrane trafficking [BR:
boe04131
]
Protein recycling
Others
Retriever complex
106296279
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
106296279
NCBI-ProteinID:
XP_013587833
UniProt:
A0A0D3CPU6
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Position
C6:5003927..5010679
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AA seq
911 aa
AA seq
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MEFEFRRRDYGADHESHLLPRSRTQKHPLSSPIASRQHQMKTVRDNDPPDFFDPLRGLDV
NASAEDKVEEEEEADTSLSTEAVTQELTKEWKSLKRILIQRFPVSKVISFSPISNVITKG
FKVDTPSAQSHLEETGSEKTSLEETAKVIDQQEYLAKVRELIDGITKAWEAEDRVTSLKL
SIKVTKLLMDTTVLQFYPTVFVVVTDMLDMVGDMVWERIKEKAEHDVDGTMICTLPNDFQ
ASDICLEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLINQPREVLDRLVMMVRGL
ADPLASLYCRLYMVHRMRKLGFCRSGYLIKCVKDIEDVLAPILVGKDGCSCITDDKKLLF
NLMEPAIEYIMKCLLLTGRQENNVLGILEELGFGRNKSQPSDNSSHVSILLHHLLKALPS
EIVSSQAMEILHMIKCSNDCSFSQVLNYRLLGNRLCEGRSQEGFLSSLVNEIMQAASQYQ
TLYDYLRIMDAYVDLLLQNKMENHLDALLDALLDDIVTLARDKFLSEEEQASLQSIILKL
LSHFEDLQKVLSLNHFIEILDLMSGTSKKSVNMHLLSMGTRNGCICDSTTVQLLFEVSQG
LYDATDFVNIKDDDNRQTSHLISRFVEMVDYGAERERQLLFLAECRGAFSGIHELKETLV
RSSNTLAVKAGKKHINFVKSCLAFSEVTIPSVTVPTKQINLYLETAEVALLGGLISHTDG
LVMSAVECLEDVAPTDGLKSIDADSMASVVCNLCSLLVMVPGNPEKGVLEILKSIFSATC
SSSWAMSRLKVKILCAIISLLSTLAQDNLPYRSANPEIIGNDLLFFGDSSYKNELVSWSQ
LVVGELVDAIEQESSQTARGNIALEACNCISSALVMNEKVSQLCSRLLETAKGCLGATDR
YLEATKQSLHL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagttccggcgtcgcgactatggagctgaccatgaatctcatctccttcct
cgctcacgaactcaaaagcaccctctttcctctccaattgcttctcgtcaacaccagatg
aaaactgtcagagataacgatcctcctgacttctttgatccattgaggggattggatgtg
aatgcttcagcagaagacaaggttgaagaagaagaagaagcagatacttctctatccact
gaagcggtgactcaggagctgacaaaggagtggaagtctcttaaacgtatcttgatccag
cgcttccctgtctccaaagtcatttctttttctccaatatctaatgtaataacgaaaggt
ttcaaagttgacaccccttccgctcaatcacatttggaggaaacaggcagcgaaaagact
tctctggaagaaactgctaaagtgatagaccaacaggaatatctagccaaagtacgcgag
ctaatagatggaataaccaaagcttgggaggctgaagatcgagtaacatcgttaaagtta
tcaattaaggtcacaaaacttctgatggacacaacagttttacagttttatcctacagtc
tttgttgtagtcactgacatgcttgatatggttggggatatggtgtgggaacggatcaag
gagaaagcagaacatgatgttgatggaacaatgatctgcaccttaccgaatgattttcaa
gcaagtgatatctgcctcgaagcaagagagacttgctataactggttctgcaaagttggt
tcagttcgagaacttcttccccgcatttacttggagctggcaattttaccttgctggcgt
ttcctcattaatcaacccagagaagttctggatcgtttagtcatgatggtgagaggtctt
gcagatccactggcatctttgtattgtcgtctttatatggtgcatcgtatgcggaagttg
ggtttctgccgttcaggatatctaatcaaatgcgtcaaggatattgaagacgtattggca
cctattttagtgggcaaggacgggtgttcctgtattacagacgacaaaaagttgcttttt
aatttgatggaaccagccattgagtatataatgaagtgcttattgctcactggacgtcag
gagaacaatgtgttgggcatacttgaggagcttggatttggaaggaataaatctcagccg
tccgacaactcttcacacgtgtccattttacttcatcacctactcaaggcacttccatcc
gaaatagttagttcacaagctatggagatcctgcatatgattaaatgcagcaatgattgt
tctttcagtcaggttttgaattacaggttacttggaaataggttgtgtgaagggagatct
caagaaggttttctgagttcactcgtcaatgaaattatgcaggctgcttctcagtatcag
acgctgtatgactacttgagaattatggacgcatatgtggatctgttgttgcagaacaag
atggaaaatcatttggatgcgctcttggatgcgctcttggatgatattgtaactctagct
cgtgacaagtttctttctgaagaagaacaagcaagtttgcaatccataattttgaagctg
ctgtctcatttcgaggacttgcaaaaagtactttctctgaatcatttcatcgagatcttg
gatcttatgtctgggacttcaaaaaaaagtgttaacatgcatctcctgagcatgggtact
aggaatggctgcatatgtgattcaacaaccgtgcaattgctttttgaagtttctcagggt
ctttatgatgctacagatttcgttaacataaaggatgatgataatcgacagacatcacat
ttaatttctcgctttgttgagatggttgattatggggcagaaagggaacgccagttgttg
tttttggcggagtgtcgtggcgcctttagtgggattcatgaacttaaggagacacttgtc
cgttcaagcaacaccttggcagtaaaagcaggaaagaagcatatcaactttgtaaagtct
tgcctagcattcagcgaagttaccattccatctgttacagttcctacaaaacagataaat
ctttatctcgaaactgctgaggttgcgcttttaggtggtttgatttctcataccgatgga
ctggtcatgtcagctgttgagtgtctagaggatgtagcgccaacagatggtttaaagtca
attgatgcggatagtatggcgtcggtggtatgcaatttgtgcagcctcttggtaatggtt
ccaggtaatcctgagaaaggcgtgttggagatccttaagagcatattttctgctacttgc
tctagttcatgggcaatgtcgagattgaaggtgaagatactttgtgctatcatttcactc
ttgtcgacacttgcccaggataatctgccttaccgttctgccaatccagagataattgga
aacgatttactgttctttggtgattcgtcatacaagaatgaacttgtctcttggagtcag
ctagttgtaggtgaacttgtagacgctattgaacaagaatcttcacagactgctcgcggg
aacattgcgcttgaagcttgcaattgcatatcatcagcactagttatgaatgagaaagtc
tcacaactttgctcgagactgctcgaaacagcaaaaggttgtttgggtgccacggacagg
taccttgaagccactaagcaatcactccatttatga
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