Brassica oleracea (wild cabbage): 106296379
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Entry
106296379 CDS
T04124
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106296379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106296379
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
106296379
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
106296379
NCBI-ProteinID:
XP_013587991
LinkDB
All DBs
Position
C1:12583222..12585620
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AA seq
316 aa
AA seq
DB search
MRPPLTGGRGGGGGFSGGRGGGGFSGGRSGGRGRSGGRGFGDRGGGRSSGRGMRGRGDRG
RNGRGAPGRGGMKGGSKVIVEPHRHPGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNE
DGTKTEYRVWNPFRSKLAAAILGGVDNIYIKPGAKVLYLGAASGTTVSHVSDIVGPEGCV
YAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVVFADVAQPDQARIVA
LNSSFFLKTGGHFIISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHA
CVVGTYRAPKKTKVAA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctctaactggtggacgtggtggtggtggtggctttagcggcggacgtggt
ggcggtgggtttagtggtggacgttcaggaggaagaggtaggtcaggaggaagaggtttc
ggtgaccgtggcggtggtcgcagcagcggtagaggcatgagaggtagaggagatcgtggt
cgcaacggtagaggagcaccaggacgtggtggaatgaagggaggtagcaaggtgattgtg
gagccacacagacacccaggagtgttcattgcaaagggtaaggaggatgctctcgtcact
aagaacttggttcctggtgaggctgtttacaacgagaagagaatctctgttcagaatgaa
gatgggaccaagactgagtacagggtgtggaatcctttccgttctaagttggctgctgct
attctcggtggtgttgataacatttacatcaaacctggtgctaaagttctataccttggt
gctgcttctggaacaacagtctctcacgtgtctgacattgttggacctgaaggttgtgtt
tacgctgttgagttctctcaccgaagtggtagagatttggtgaacatggcgaagaagaga
actaatatcattccaatcattgaggatgctagacaccctgctaaatacagaatgcttgtc
ggcatggttgatgttgtcttcgctgatgttgctcagcctgatcaggctaggatcgtggct
ttgaactcaagcttcttcctcaaaacaggaggtcactttattatctcaatcaaggcaaac
tgtattgactcaacggttccggcagaagcagtgtttcagagtgaagtgaagaagctgcaa
caggagcagttcaagccagcagagcaagtgacgcttgagccatttgagcgtgatcatgcc
tgtgtcgtcggtacataccgtgcgcctaagaagaccaaggttgctgcttag
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