Brassica oleracea (wild cabbage): 106296416
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Entry
106296416 CDS
T04124
Name
(RefSeq) beta-hexosaminidase 3
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00511
Other glycan degradation
boe00513
Various types of N-glycan biosynthesis
boe00520
Amino sugar and nucleotide sugar metabolism
boe00531
Glycosaminoglycan degradation
boe00600
Sphingolipid metabolism
boe00603
Glycosphingolipid biosynthesis - globo and isoglobo series
boe00604
Glycosphingolipid biosynthesis - ganglio series
boe01100
Metabolic pathways
boe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106296416
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106296416
00513 Various types of N-glycan biosynthesis
106296416
00531 Glycosaminoglycan degradation
106296416
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
106296416
00604 Glycosphingolipid biosynthesis - ganglio series
106296416
00511 Other glycan degradation
106296416
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106296416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106296416
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
106296416
Chaperones and folding catalysts [BR:
boe03110
]
Intramolecular chaperones
Others
106296416
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Glyco_hydro_10
MICAH
Motif
Other DBs
NCBI-GeneID:
106296416
NCBI-ProteinID:
XP_013588005
LinkDB
All DBs
Position
C6:31606537..31613793
Genome browser
AA seq
534 aa
AA seq
DB search
MRGIATKISGVAPLFLLFIAGAVSAFEDIEKLRIWPLPAEVSHGGRRMYLSEDFKLVTEG
SKYEDPSGILKEGFDRMLAVVRLSHVVSGHRNSSSSGGSALLEGLHVIISSSTDELEYGA
DESYKLVVASREKPYAQLEAKSVYGALHGLQTFSQLCHFNMKKKVIEILMTPWNITDQPR
FSYRGLLIDTSRHYLPLPVMKNVIDSMTYTKLNVLHWHIVDTQSFPLEIPSYPKLWNGAY
SPTQRYTFEDAAEIVNYAGRRGIHVLAEIDVPGHALSWGKGYPSLWPSKNCQEPLDVSSD
FTFKVIDGILSDFSKIFKFKFIHLGGDEVNTTCWSTTPRISKWLKKHRKTEAEAYEYFVL
RAQKIASSHGYEIINWEETFNNFGNKLNPKTVVHNWLGTGVVGRVTAAGLRCIMSNQDKW
YLDHIDTPWQMFYANEPFEMIKDEKRQSLVLGGEVCMWGEHIDASDIQQTIWPRAAAAAE
RLWTPYTKLAENPDKVTTRLAHFRCLLNERGVAAAPLVGGGRVAPFEPGSCLAQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatagcaacaaagatctccggcgttgcgccgttgtttttgctattcatcgcc
ggggcagtctccgcctttgaggacatcgaaaagttaaggatttggcctttaccggcggaa
gttagccacggtggccggagaatgtatttaagcgaagatttcaagcttgtgacggaggga
agcaaatacgaggatccttcaggcattttgaaagaaggattcgatagaatgcttgcagtt
gtgaggctgagccacgtcgtctctggccatcggaactcttcaagctccggcggatctgct
ctgcttgagggactccacgtcatcatatcttcctccaccgatgagttggaatatggagca
gacgaatcgtacaaattagtggttgcatcccgagagaagccgtatgcacaacttgaggca
aaaagcgtttacggtgcattgcatggcctacagacattcagccagttatgccattttaat
atgaagaaaaaggtaatagagattttaatgactccatggaatatcacagaccagcccaga
ttctcttaccgtggtcttttgatcgatacatcccgacattatttgccactacctgttatg
aagaacgtgattgattctatgacatacaccaagctaaatgtacttcattggcacattgtg
gacacacagtcatttcccttagagattccttcgtatccaaaactatggaatggcgcttat
tctcccactcagagatacaccttcgaagacgctgcagagatcgtcaattatgctgggcga
cgagggattcatgtcttagctgagattgatgttccaggccacgctctctcatggggaaag
ggatatccttccttgtggccgtccaagaattgtcaagaaccgcttgacgtgagtagtgac
tttacattcaaggtcattgatggcattctctccgatttcagcaagatctttaagtttaaa
tttatccacttgggaggtgacgaagtaaatacaacttgctggtctacaacacctcgaata
tccaaatggctaaaaaaacatcggaaaactgaagcagaagcttatgaatatttcgtactg
agggcgcaaaaaattgcttcgtcacacggatatgaaatcatcaactgggaagaaaccttc
aacaactttggaaacaaattaaacccaaaaacggtggtccacaactggcttggtacagga
gttgttgggagagtgacggcggccggtttaaggtgcataatgagtaaccaagacaaatgg
tatttggaccatatagacacaccgtggcaaatgttttacgcgaacgagccatttgagatg
ataaaggatgaaaagcgacaaagtctagtacttggtggtgaagtgtgcatgtggggtgaa
catattgatgcttctgacattcagcaaaccatttggcctcgtgctgccgcagctgcagag
cggttgtggacaccctacacaaagttggctgaaaatccagacaaggtaactacgaggttg
gctcactttagatgcttgttgaatgaaagaggagttgcagctgcacctttggttggtgga
ggacgagtcgcgcctttcgagccaggttcatgtctcgctcagtaa
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