Brassica oleracea (wild cabbage): 106296553
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Entry
106296553 CDS
T04124
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106296553
Membrane trafficking [BR:
boe04131
]
Autophagy
Other autophagy associated proteins
Others
106296553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_Vps41
BCAS3_WD40
WDR55
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
106296553
NCBI-ProteinID:
XP_013588158
UniProt:
A0A0D3CVE6
LinkDB
All DBs
Position
C6:complement(23871595..23873833)
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AA seq
429 aa
AA seq
DB search
MATVSSSSPSSPWPNPNPDSTSPSDSHSHHRDRGDDAEPLDSFSSMTLNSEDPNHNPDPI
QTPSSPPAPDSPATPPPSLLHLSFNQDHACFAVGTSRGFRILNCDPFREIFRRDFDRGGG
VAVVEMLFRCNILALVGGGPDPQYPPSKVMIWDDHQSRCIGELSFRSDVRSVRLRRDRIV
VVLEQKIFVYNFVDLKLMHQIETIANPKGLCAVSQGAGGSMVLVCPGLQKGQVRIEHYAS
KRTKFVMAHDSRIACFALTQDGGLLATASSKGTLVRVFNTVDGTLRQEVRRGADRAEIYS
LAFSSNAEWLAVSSDKGTVHVFGLKVNSGSQVKETPPIAAELTRSSSSPSSSLSLFKGVL
PKYFSSEWSVAQFRLVEGTQYIVAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYH
NCLKPPSVF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtctcctcctcctccccctcttctccctggcccaaccctaatcccgattcc
acgtctccctcagattcccactcccaccaccgcgatcgtggagacgacgccgagcctctc
gattccttctcctcaatgactctcaactccgaagatcccaatcacaaccccgatccgatt
caaaccccttcctctccacccgcgccggattcgccggcgacgcctcctccatccctcctc
cacctctccttcaaccaagaccacgcctgcttcgccgtcggcacctcccgcggcttccgc
atcctcaactgcgaccccttccgcgaaatcttccgccgcgatttcgaccgcggcggcgga
gtcgccgtcgtggagatgctcttccgatgcaacatcctagccctcgtgggcggcgggccc
gacccccagtaccctcccagcaaggtcatgatctgggacgatcaccagagccggtgcatc
ggcgagctctccttcaggtccgacgttaggtccgtaaggctcaggagggatcggatcgtt
gtcgttcttgagcagaagatctttgtctacaacttcgtggacctcaagctgatgcatcag
atcgagacgatcgcgaatcctaaggggctgtgcgctgtctctcagggtgctggtggctcg
atggtgttggtgtgccctggcttgcagaaagggcaggtgaggatcgagcattatgcttct
aagcggactaagttcgtcatggctcatgattcgaggattgcttgcttcgctctcacgcaa
gatgggggtttgttggctacggctagctctaaggggactcttgttcgggtgtttaatact
gttgacggcaccttgcgccaagaggttaggaggggtgcagatagagcggagatatatagc
ctcgctttctcttcaaatgctgaatggctagctgtctcaagcgacaaaggaactgtccat
gtctttggtctcaaagtcaactccggctctcaagtgaaagagacacccccaattgcagct
gaacttacccgctcttcctcatccccatcatcctctctgtcattattcaaaggagtgttg
ccgaagtatttcagctcggaatggtcggtggctcagttcagattggttgaaggaactcag
tacatagtcgcgtttggtcatcagaagaacactgttgttattcttggcatggatgggagc
ttctacagatgccagtttgatccagtgaacgggggagaaatgtctcagcttgagtatcac
aactgtctaaaaccaccttctgttttctag
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