KEGG   Brassica oleracea (wild cabbage): 106296562
Entry
106296562         CDS       T04124                                 
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106296562
Enzymes [BR:boe01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     106296562
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    106296562
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TraT
Other DBs
NCBI-GeneID: 106296562
NCBI-ProteinID: XP_013588174
LinkDB
Position
C6:35971006..35974221
AA seq 599 aa
MEDIEDMFAGGAGGAPPGFRLPLNAVGVNPKRNTSKRSISKQKDEVTDSNRDSLAPPSMK
IPGTQTIYIKTFGCSHNQSDSEYMAGQLTAFGYGLTEVPEEADLWLINTCTVKSPSQSAM
STLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVRLL
NRKTLPSLDLPKVRRNNFIEILPVNVGCLGACTYCKTKHARGHLGSYTVESLVERVRTVI
SEGVKEIWLSSEDTGAYGRDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFMLEHLKE
IAAVLRHPCVYTFLHVPVQSGSDAVLTAMNREYTSGEFRTVVDTLTELVPGMQIATDIIC
GFPGETDEDFSQTVGLIKDYKFAQVHISQFYPRPGTPAAKMKKVQSKIVKQRSRELTCVF
EAFAPYTGMEGKEERIWITEIATDGVHLVGHTKGYIQVLVSGPESMLGTSAIARITSVGR
WSVFGEVIETLASTNVVTQVREETKPACTSDVSTCETCACFAESCCGEGKSGEACNISGD
ITGQDHKTGEKSMTKEEEKQEVVSHWGLVDKALVCGVFVSSLTILVLIISIASRVLLRQ
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggaggatatcgaggatatgttcgccggaggagctggcggtgcaccgccggggttccga
ttaccgttaaacgccgtcggagttaatccgaagaggaatacgagtaaacgtagcatctcg
aagcagaaggatgaagttactgattcgaatcgcgattcgcttgctccgccatcgatgaag
atcccaggaactcagacgatttacatcaagacgtttggttgttcacataatcagagtgat
agtgagtatatggctgggcagcttacggcatttggctacgggttaacagaagtaccagag
gaggctgatctgtggctcattaacacttgtactgtgaagtccccgagccagtctgcgatg
tctactctgataacaaggggtagaagtgggaaaaagcctcttgtgatagccggatgtgtt
cctcagggaagccgtgaccttaaagaactcgaaggcgttagtgtggttggagtgcaacag
attgatcgtgttgttgagattgttgaagagactcttaagggtcatgaagtgaggctgctg
aatcggaagactttgccttcgcttgatctcccaaaggtgcggaggaacaattttatcgaa
atccttcccgtcaacgttggctgtttgggtgcctgtacttactgcaagaccaagcatgcc
cgtggtcacttaggaagctacacagtcgagagccttgtggagcgggtgagaactgtaatc
tctgaaggagtcaaggaaatttggttgagcagcgaggacactggagcctatggtcgtgac
ataggagttaatcttccaattctgcttaatgccattgttaaggagcttccttctgatcaa
agcacaatgctaaggattgggatgactaatcctccctttatgctcgagcatttgaaagaa
atagcagctgttttacgtcacccatgtgtctacacatttcttcacgtccctgtgcaatct
ggcagtgatgctgtgttgacggccatgaacagggaatatacatcgggtgagttcaggacc
gtggtagacaccttaacagaacttgtgccggggatgcaaattgctactgacataatatgc
ggattccctggggaaaccgatgaagacttttctcaaactgttgggcttatcaaggattat
aagtttgctcaagttcatatatctcagttttaccccagaccagggaccccagcagcaaag
atgaagaaggtacaaagtaagatagtaaagcaacgaagccgtgagctaacttgtgtcttt
gaggcttttgcaccttacaccggaatggagggcaaagaagagagaatatggataaccgaa
atagctaccgacggtgtccacttggttgggcataccaaaggatacattcaggtcttagtt
agtggaccagaaagtatgcttgggacttcagcgatagcgaggataacatcagtagggaga
tggtcagtgttcggggaggtgattgagacactagcctctacaaatgtagtaacacaagtc
cgagaggagacaaagccggcatgtacctctgatgtcagtacttgtgagacttgcgcatgc
tttgctgagagctgttgtggagaagggaaatcaggagaggcctgtaacatttctggagat
atcacaggacaggatcacaaaacaggagaaaagtcaatgacaaaagaggaagagaagcaa
gaagtggtatcgcattggggtttggttgacaaggcacttgtgtgtggagtgttcgtaagc
tcgctcacaattcttgttttgattattagcatcgcatctagagttttgctgcgtcaatga

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